Amycolatopsis mediterranei S699: AMES_6163
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Entry
AMES_6163 CDS
T02190
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
amm
Amycolatopsis mediterranei S699
Pathway
amm00470
D-Amino acid metabolism
amm00550
Peptidoglycan biosynthesis
amm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMES_6163 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMES_6163 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amm01011
]
AMES_6163 (murD)
Enzymes [BR:
amm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AMES_6163 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
amm01011
]
Precursor biosynthesis
Amino acid ligase
AMES_6163 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
AlaDh_PNT_C
TrkA_N
ADH_zinc_N
Shikimate_DH
XdhC_C
NAD_binding_7
2-Hacid_dh_C
AdoHcyase_NAD
Sacchrp_dh_NADP
3HCDH_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AFO79699
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Position
complement(6936310..6937719)
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AA seq
469 aa
AA seq
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MKDIAGSHVLVAGAGVTGKSVVPVLVELGARVTVTDGNAERLAELEGLGAELVPGLTEPP
SDVVLVVTSPGWRPTSPLLVAAAEAGVEVIGDVELAWRVGRLREHPPSWLVVTGTNGKTT
TVGMLESILNAAGSNAVACGNIGYAALDAVRAGYDVLAVELSSFQLHWSSTLAPDAAAVL
NLAEDHIDWHGSMDEYAAAKGRVYTRAKVAVHNADDDWSTRIAAEHAPEGTPRVGFQLDT
PRAGELGVVEDLLVDRAFVADPENSAEALATLADVRPAGPHNVANALAAAALARAHGVSP
DAVAKGLREYQPAPHRAVEVAEVAGVRYVNDSKATNPHAAAGSLRAHASIVWIAGGQLKG
ASVDELVSSIAGRLRGVVLLGVDSPVIAAAVARHAPDVPVNSLRPGDDEPMTAAVSAASA
MARPGDVVLLAPAAASLDMFSSYGERGDAFAAAVRVLRDDAAGEPSDDS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacatcgccggttctcacgttctcgtcgccggggccggggtcaccggcaagtcg
gtggtgccggtgctggtcgagctgggtgcgcgggtcaccgtcaccgacggcaacgccgag
cgcctggccgagctcgagggcctcggcgccgagctggtgccgggcctgaccgagccgccg
tccgacgtcgtcctggtcgtcaccagcccgggctggcggccgacgtcgccgctgctcgtg
gccgccgccgaggcgggcgtcgaggtgatcggggacgtcgagctggcctggcgcgtcggc
cggctgcgcgagcacccgccgtcctggctggtggtgaccggcaccaacggcaagacgacc
accgtgggcatgctcgaatcgatcctcaatgccgccggcagcaacgccgtggcctgcggg
aacatcggctacgcggcgctcgacgcggtccgggcgggctacgacgtgctggccgtggag
ctgtcgagcttccagctgcactggtcctcgacgctggcgccggacgccgccgcggtgctg
aacctggccgaagaccacatcgactggcacggctcgatggacgagtacgcggccgcgaag
ggccgggtctacacccgcgccaaggtcgccgtgcacaacgccgacgacgactggtccacc
cggatcgccgccgagcacgccccagaaggtaccccccgcgtcggcttccagctcgacacc
ccgcgcgccggcgagctgggcgtggtcgaggacctgctggtcgaccgcgctttcgtcgcc
gacccggagaacagcgccgaggcgctggccaccctcgccgacgtccgtccggcgggcccg
cacaacgtcgccaacgccctcgccgcggccgcgctcgcccgcgcccacggcgtgtcgccg
gacgccgtggcgaagggcctgcgcgagtaccagccggccccgcaccgggccgtggaggtc
gccgaggtggccggggtgcggtacgtcaacgactcgaaggcgaccaacccgcacgcggcc
gccgggtccctgcgggcccacgcgagcatcgtgtggatcgccgggggccagctcaagggc
gcgtcggtcgacgagctggtgagcagcatcgccggccgtctccgcggagtcgtgctcctc
ggcgtcgattcacccgtgatcgccgccgcggttgcgcgacacgcgccggatgtcccggtg
aacagcctccgtccgggtgacgatgaacccatgactgcggcggtgagtgcggccagcgcg
atggcccgacccggtgacgtggtgctgctggcacccgccgcggcgtcgttggacatgttc
tcgagctacggcgagcgcggcgacgcgttcgccgcggccgtgcgtgtcctccgcgacgac
gcagcgggggagccgagtgacgacagctga
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