Amycolatopsis mediterranei S699: RAM_41515
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Entry
RAM_41515 CDS
T01822
Name
(GenBank) endopolygalacturonase
Organism
amn
Amycolatopsis mediterranei S699
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AEK46770
UniProt:
A0A9R0UDE4
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Position
complement(8887066..8888439)
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AA seq
457 aa
AA seq
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MDGRFTRRQLIKGGLAVAAVPLLPAVASAAPRIDVPTLPWPAANDIVANTTIPVFPDRRF
PITGYGAKNDGKTDNTAAIAKAIDACVAAGGGHVIVPGGGSFLTGAIRLKSNVDLHLEAG
SVLKFSGDAAKFPNVLTRYEGIECVNHSPMIYAYQEKNIGLTGSGTLDAAATSSWNKGSD
RAYLETLVAKGTPPEKRVVPGSGHTMRSAFVEPYACENVLIQGITLKNSMFWQLHPTLCR
NVTVDGVSTDPSTAHSNTDGCDPESCDHVVIANCTLGAHDDNIAIKSGRDADGRRVNVPC
QNLVVVNCVMNGNWGAITCGSEQTGGIRNVYAYKLTVKGDTKFALYVKSNTLRGGFSENI
NLDSVSGTFARNFVYVTSTYNSQTGSYVPSFGPFTISNCSSTKIAGKTFDVSGLSNAHVH
GFAVANSTFKGVSDTSNTLKYVDNARFTNVTVNGKPI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaggttcacccggcggcagctgatcaagggcggcctcgcggtggcggcggtg
ccgctgctcccggccgtcgcttcggcggcgccccgcatcgacgttcccacgctcccgtgg
ccagcggcgaacgacatcgtcgcgaacacgacgattcccgtgttcccggatcgcaggttc
ccgatcaccggttacggcgcgaagaacgacggcaagaccgacaacaccgcggcgatcgcg
aaggcgatcgacgcctgtgtcgcggccggcggcgggcacgtgatcgtgccgggcggcggg
agtttcctgaccggcgccatccggctcaagagcaacgtcgacctgcacctggaagccggc
tcggtgctcaagttcagcggtgacgcggcgaagttccccaacgtcctgacgcgctacgaa
ggcatcgagtgcgtcaaccactcgccgatgatctacgcctaccaggaaaagaacatcggc
ctcaccggcagcggcacgctcgacgcggcggccacgtcgtcgtggaacaagggcagcgac
cgggcgtacctggaaacgttggtggccaagggaaccccgccggagaagcgggtggtgccg
ggctcggggcacaccatgcggtcggcgttcgtcgagccgtacgcctgcgagaacgtgctg
atccagggcatcaccctgaagaactccatgttctggcagctgcacccgacgctgtgccgc
aacgtcacggtcgacggcgtcagcaccgaccccagcaccgcgcacagcaacaccgacggc
tgcgacccggaatcgtgcgaccacgtcgtcatcgcgaactgcaccctcggcgcgcacgac
gacaacatcgccatcaagtccggccgcgacgccgacgggcgccgggtgaacgtcccgtgc
cagaacctcgtcgtggtgaactgcgtgatgaacggcaactggggcgcgatcacctgcggc
agcgagcagaccggcggaatccgcaacgtctacgcgtacaagctcaccgtgaagggtgac
acgaagttcgccctgtacgtgaagtccaacacgcttcgtggcgggttctccgagaacatc
aacctcgacagcgtttccggcacgttcgcgcggaacttcgtgtacgtgacatcgacgtac
aacagtcagaccggcagctacgtcccgtcgttcgggccgttcacgatcagcaactgttcg
agcacgaagatcgcgggcaagacgttcgacgtcagcgggctttcgaacgcccacgtgcac
gggttcgccgtggcgaactccacgtttaagggcgtgtcggacacgtcgaacacgctgaag
tacgtggacaacgcccgcttcacgaacgtgacggtcaacggcaagccgatctga
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