Alkaliphilus metalliredigens: Amet_1851
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Entry
Amet_1851 CDS
T00551
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amt
Alkaliphilus metalliredigens
Brite
KEGG Orthology (KO) [BR:
amt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amt03021
]
Amet_1851
Transcription machinery [BR:
amt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Amet_1851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Xre-like-HTH
Phage_antitermQ
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ABR48020
UniProt:
A6TPA2
LinkDB
All DBs
Position
1952894..1953406
Genome browser
AA seq
170 aa
AA seq
DB search
MYKRYYRDVYRTVYYITKEKELSQDLTNDAFLKAYDKIQSLDDINKFKQWICVIAANLAK
NHIRKQSKVLPFYPMETLEDKHNTEDMVIEKIDLEEKREKLRRGLQQLDPDAKEILILRY
YHNLTYEEMGKALSLKQGTVKSRLKRSKDKLFKIFNSEDEKNEKRQCEPI
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtataaacgatactatagagatgtctatcgaactgtatactatattacaaaagagaaa
gaactatctcaagatcttacaaatgatgcttttttaaaggcatatgataagatacaatcc
cttgatgatatcaataaatttaaacaatggatttgtgtcatcgccgctaatttagctaaa
aatcatattcgaaagcagagtaaggtacttcctttttacccgatggaaacactagaagat
aagcacaatacagaggatatggtgattgaaaaaatagatctggaagaaaaaagagaaaaa
ttgagaaggggactacaacagttagatcccgatgccaaggaaattcttattttaaggtac
taccacaacctaacttatgaagaaatgggaaaggcattatccttgaaacaaggtactgtc
aaatcaaggttgaaaaggtccaaggataaactctttaaaatattcaactcagaggatgag
aaaaatgaaaaaagacaatgtgaaccaatttga
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