Aeoliella mucimassa: Pan181_42950
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Entry
Pan181_42950 CDS
T06952
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amuc
Aeoliella mucimassa
Pathway
amuc03030
DNA replication
amuc03430
Mismatch repair
amuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pan181_42950 (dnaE)
03430 Mismatch repair
Pan181_42950 (dnaE)
03440 Homologous recombination
Pan181_42950 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amuc03032
]
Pan181_42950 (dnaE)
03400 DNA repair and recombination proteins [BR:
amuc03400
]
Pan181_42950 (dnaE)
Enzymes [BR:
amuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pan181_42950 (dnaE)
DNA replication proteins [BR:
amuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pan181_42950 (dnaE)
DNA repair and recombination proteins [BR:
amuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pan181_42950 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDU58069
UniProt:
A0A518ATL6
LinkDB
All DBs
Position
5250838..5254443
Genome browser
AA seq
1201 aa
AA seq
DB search
MDAPPFVHLHCHSHYSLLDGASPIKKLVARAKELGMNGLALTDHGNLYGALEFYRACKDE
GINPIVGYEAYIAPASRFDKGGASSSKEASYHLTLLAQNQTGFKNLVKMSSRAFLEGFYH
KPRIDKELLEAHSDGIICLSGCVSGELSRTLLSGHTADEALAHGSKIVEWFERVFGPRYF
LEIQDNGVDIQRAAMELTVELANKVGVPLVATSDAHYVNREDAEAQDVLLCINTGKYRTD
TGRMKMEGDEFFLRSPEEMFAALPDHADALKRSQSIADSVDIDLELGKRYFPTFTTPGNT
EPDISASEEYLRELVIKGLKERYSDVLHRWQNNDPATGELSDEVMARVDRELGVINKLGF
PDYFLIVWDFVRFAVDNNIPCTARGSGVGSLVCFSLKLSHVCPLEYDLLFERFLDESRLE
APDIDIDFCKQRRVEVIQYVKDKYGEANVAQIGTFGTLAARAAIKDVGRTMSMPIFRVDQ
ITAMIPDQLGISLDKALEQSEDLKAAYESDPEIRELLDLARKIEGLARNVGTHAAAVVIA
KKPVDEYVPLQHVKGKTEVITQWSMNDVEAAGLLKMDFLGLRNLTILARSIDLIEESTGE
RIDPYKFPLDDRESYALLCRGETKGIFQLESGGIRDLLQRMKPDNFRDIIATAALYRPGP
LEGGMVDQYIEVKHGRRPAEYPHPVMEEVLDETHGVMVYQEQVMRILNRLGGIGLSESYK
CIKAISKKKLPIIAKFREEFLNGAQEKGLDKKKAEELFGMIEKFAGYGFNKSHSTAYALI
AYMTAYLKAHYSVEFMAALLSGDIPGRNFKSKDSLVEHLEDCKRMEIEVVPPDVNSSFVD
FAVREGRILFGLSAIKGCGGGAADAIVEAREKDGPFRSLFDFCERIDPSSCNRSTIETLV
KAGAFDSLGAHRSQLMAIVDRALQAGASAMKDRRSGQKGLFDSLEEDVQKADAADLPDIP
EMEEKDRLLMEKEVLGFYLSSHPLAEFESLLRTYCTHNSKQVTELEHRSEVVMGGMLAAI
KFSHTKNPKPGKPSKYAMWDLEDLDGIVRCILWPEQFADFGHLVEPDAKVAVRAAIDRRP
GAEEVNLIVNEVMTIESLAERYTSGLSVRVDEARHGMDMLGPLHEIVRGYPGHKTLKLHL
CLEDGAVAHIESGKKVDLDPELRRRLDELLGGGCVIPIGSPPKPTSGGQNGNGRGRGNYG
R
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccctccgtttgtgcacctgcactgccatagtcactacagcctgctagacggg
gcgagcccgattaaaaagctcgttgcgcgggccaaagagctcggcatgaacggcctagca
cttaccgaccacggcaacctgtacggggcgctcgaattttaccgggcgtgcaaagacgaa
ggcatcaacccgattgtcggctacgaggcgtacatcgccccggccagccgattcgacaaa
gggggagcctccagcagcaaagaggccagctaccacctgacgttgctcgcccagaaccag
accggcttcaagaacttggtgaaaatgtcgagccgggcgtttctcgaaggcttttaccac
aagccccgtatcgacaaggaattgctcgaagcccacagcgacggcatcatttgcctgagc
gggtgcgtatcgggcgagttgagtcgcaccttgctctcgggccataccgccgacgaggcc
ctcgcccacggcagcaaaatcgtcgagtggttcgagcgggtattcggcccgcggtacttc
ctggagatccaagacaacggagtcgacatccagcgagcggcgatggagctgaccgtcgaa
ctggccaacaaggtgggtgttccgctcgtcgcgaccagcgacgctcactacgtcaaccgc
gaggatgccgaagcccaggacgtgctgctctgcatcaacaccggtaagtaccgcaccgac
accggccggatgaagatggaaggcgacgagttcttcctccgcagccccgaggagatgttc
gctgcgctaccggatcacgccgacgcgctcaagcgaagccaaagcatcgccgactcggtc
gatatcgatctggaactcggcaaacggtacttccccacgttcaccacgccgggcaacacc
gagcccgacatcagcgcgagcgaagagtacctacgcgagctggtgattaagggacttaaa
gaacgctactccgacgtgctacaccgctggcagaacaacgatccagcgaccggcgaactg
tcggacgaggtcatggcccgcgtcgaccgcgagctgggagtcatcaacaagctcggcttc
cccgactacttcttgatcgtgtgggacttcgtgcgttttgcggtcgacaacaacatccca
tgcacggctcgtggttccggcgtgggctcgctggtttgtttctcgctgaaactcagccac
gtctgcccgctggaatacgacctgctgttcgagcggttcctcgacgagagccggctggaa
gcccctgatatcgatatcgacttctgcaagcagcgccgggtggaagtcatccagtacgtg
aaagacaagtacggcgaggccaacgttgcccagatcggcacgttcggaactctggccgcg
cgggcggcgatcaaggacgtcggccggacgatgtcgatgccgatcttccgggtcgatcag
atcacggccatgatccccgaccaactcggcatcagcctcgacaaggccctcgagcagtcc
gaagacctgaaagcggcttacgaaagcgacccggagattcgcgagctgctcgatctggct
cgcaagatcgaaggcctcgcccgcaacgttggtacccatgcggccgcggtggtgatcgcc
aagaagccggtcgacgaatacgtgccgctgcagcacgtgaaaggcaagaccgaagtcatc
acccagtggtcgatgaacgacgtggaagccgctgggttgctaaagatggacttcctcggt
cttcgcaacctgacgatcctcgcccgcagtatcgacctgatcgaggagtcaaccggcgaa
cgcatcgatccctataagttcccgctcgacgacagggagtcgtacgccttgctctgccgc
ggcgagaccaagggtatcttccagctcgaatcgggcggtattcgtgaccttctgcagcgg
atgaagcccgacaatttccgcgacatcatcgctaccgcggccctctaccgacctggcccg
ctcgaaggcggcatggtcgaccagtacatcgaagtgaagcacggccgccgccccgccgag
tacccgcaccctgtgatggaagaggtgctggatgaaacgcatggcgtaatggtgtatcaa
gaacaggtgatgcggattctcaatcgcctgggtggaatcggcctgtccgaatcgtacaaa
tgtattaaagcgatcagcaagaagaagctgccgatcattgcgaagttccgcgaggagttc
ctgaacggggcccaagagaaagggctcgacaagaaaaaggccgaagaactgttcggcatg
atcgagaagttcgccggctacggcttcaataagtcgcactccaccgcctacgcgctcatc
gcgtacatgaccgcctaccttaaggcgcactactcggtggagtttatggccgccttgcta
tcgggcgacatccccggccgtaacttcaagagcaaagactcgttggtcgagcatctcgaa
gactgcaaacggatggaaatcgaggtggttccgcccgacgtgaacagctcgtttgtcgac
tttgcggtccgcgaaggccgaattctgttcggcttgtccgcgatcaaaggttgcggcggc
ggagcggccgacgccatcgtcgaggcccgagaaaaggatggcccgttccgcagtttgttc
gacttctgcgagcggatcgaccccagttcgtgcaaccgttcgacgatcgaaacgttggtg
aaagcaggtgctttcgattcgctcggcgcgcatcgctcgcaattgatggccattgtcgat
cgggcgctgcaagcgggtgcttcggcgatgaaggatcgccgcagtggccagaagggcctg
ttcgattcgcttgaggaggatgtgcaaaaagccgacgcggccgacctgcccgacatcccc
gagatggaggagaaggatcggctgttgatggagaaggaagtactcggcttctatctctcg
agtcatccgctggccgaattcgaatcgctgctacgaacctactgcacgcacaacagtaag
caagtcaccgaactcgagcatcgcagcgaagtcgtgatgggcggtatgctcgcggccatc
aagttctcgcataccaagaatcctaagcccggcaaaccgtcgaaatacgccatgtgggac
ttggaagatctcgatggcatcgttcgctgcattctgtggcccgagcagtttgccgatttt
ggccacctagtggagccagatgccaaggtcgccgtgcgggcagcgatcgaccgccgaccg
ggggcggaagaagtgaacctgatcgtgaacgaagtgatgaccatcgagtcgcttgccgag
cgatataccagcggcttgtcggttcgggtggatgaagcacgccatggcatggacatgctt
ggcccactgcacgagattgttcgcggctacccggggcacaagaccttgaagcttcacctg
tgcctggaagatggggcggtcgcgcacatcgaaagcggcaagaaggtggacctcgacccc
gagcttcgccgccgactcgacgaactgctcggcggcggctgcgtcatcccgatcggcagc
ccgccgaagccaacctctggcggccaaaacggcaacggccgggggcgcggtaattacggc
cgttag
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integrated database retrieval system
