Anaplasma marginale Dawn: U370_00985
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Entry
U370_00985 CDS
T02898
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amw
Anaplasma marginale Dawn
Pathway
amw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
U370_00985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amw03021
]
U370_00985
03400 DNA repair and recombination proteins [BR:
amw03400
]
U370_00985
Enzymes [BR:
amw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
U370_00985
Transcription machinery [BR:
amw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
U370_00985
DNA repair and recombination proteins [BR:
amw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
U370_00985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AGZ79495
LinkDB
All DBs
Position
220294..224541
Genome browser
AA seq
1415 aa
AA seq
DB search
MKMLDLYGYTSIAQSFDKICISIASPESIRAMSYGEIKDISTTNYRTFKVEKGGLFCPKI
FGPVNDDECLCGKYRKKRYRGIVCEKCGVEVTSSKVRRERMGHIELVSPVAHVWFLKSLP
SRIGALLDMPMKSIESILYSGDFVVIDPMTTPFSKGEVISESVYNQARDAYGDEGFIALT
GAEAIRELLVRLDLGAIRAGLRSELESTSSEMKRKKVVKRLRIIENFIASGNRPEWMILT
VIPVLPPDLRPLVSLENGRPAVSDLNHHYRTIINRNNRLEKLLKLNPPAIMIRNEKRMLQ
EAVDGLFDSSRRSYVSSRAGSMGYKKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
GLKLHQCGLPKKMALELFKPFICSKLKMYGVAPTVKLANKMIQSEKPEVWDVLDEVIREH
PILLNRAPTLHRLGLQAFDPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPSNGRPIIVPSKDIVLGIYYLTLQRAQAPDQEVMSFGEFSHVEYALH
EGIVHTSSKIKYRMQRCNSDGTIVSEVVETTPGRLILWQIFPQHKDLTFDLVNQVLTVKE
ITSIVDLVYRSCGQRETVEFSDKLMCLGFQYASQSGISFGCKDMIIPDTKAAHVENASEK
IKEFSIQYQDGLITRSERYNKVVDEWSKCTDLIARDMMKAISLSDEEGKLNSIYMMANSG
ARGSSSQMKQLAGMRGLMAKPSGEIIETPIISNFREGLSVFEYFNSTHGARKGLADTALK
TANSGYLTRRLVDVAQDCTVVEYDCKTKDGVVARAVIEGGAVVATLDSVVLGRVAAVDTY
NPVTEELLLSAGELIDEGKVEKIRVAGLDAVRVRSPLTCESKKGICSLCYGRDLAVGDLV
SIGEAVGVIAAQSVGEPGTQLTMRTFHVGGTAMRGVEVSNLIAVLDAEVKLVNSNVVTDK
YGNQIVMSRSCEVVLLDSVGNEKMRHSVPYGAKLYVSDGQPVKMMDKMAEWDPYTIPIIT
EKTGTIKYVDLIYGVSINEVLDESTGISNRVVIDWKLHLQGANLRPRLVLLDEDGNIATL
YNDLEASYFVPIGAVLNVQDGQKVHAGDVITRIPRESIKTRDITGGLPRVIELFEARRPK
EHAIVSDVDGYVEFGKDYYRSKRRIFIRPVDKSLPAVEYLVPKGKHTIVNEGDFVHKGDL
LMDGDPDQHDILRVLGAEALASYMISEIQQVYRLQGVRIDNKHIEVILRQMLQKVEITDP
GDTMYLVGEHAGREEVMRLNRKLEEAGKKPVAYVPILQGITKASLDTNSFISAASFQETT
KVLTEAAFSGKEDPLYGLKENVIVGRLIPAGTGFIMNKVKKLAMLDQSDYATYYNSELRE
IMGDLGDELIAEGEAASPGRSGDGYLGNGGGVVDY
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttggatttgtacggctataccagcatagcgcagtcgtttgataagatttgc
atatccattgctagccccgagagcattagggcgatgtcctacggtgagatcaaggatatc
tctaccactaactatcgcacattcaaggttgaaaaaggcggccttttttgcccgaaaatc
tttggtcccgtaaatgacgatgaatgtctgtgtggaaagtataggaagaagcggtatagg
ggcatagtatgcgagaagtgcggggttgaagtcacttcttccaaggtgagacgggagagg
atggggcacatagagctggtttctcctgtggcacatgtgtggtttttgaaatccttgcct
tcacgtatcggggcattgcttgatatgcccatgaagtccattgaaagcatcctctacagt
ggggacttcgtggttatcgatcctatgaccactccattctccaagggggaggttatcagt
gaaagcgtgtacaaccaagcccgcgatgcctacggagatgaaggttttatcgccttaacc
ggggctgaggccatacgggagttactagtaaggctggatcttggggccatcagagctggg
cttaggagcgagctggagtctacctcatctgaaatgaaaagaaaaaaggtggtcaaaaga
ttgcggatcatcgaaaacttcatcgcttctggcaatagaccagagtggatgatactaact
gtaatccctgtgctgccaccggacctgaggcctttggtgtctttggaaaatggtaggcct
gcagtttccgatctgaaccaccactataggacgattataaaccgtaataacaggctggag
aagctgcttaagctcaacccgcccgcgattatgatccgcaatgagaagaggatgctgcaa
gaggccgtggatgggctttttgatagcagtaggcgcagctacgtttcaagcagggctggt
agcatgggctacaaaaagtctcttagtgacatgcttaagggaaagcaggggcggtttagg
cagaatttgctgggtaaaagggtagactattcgggtaggtctgtaatcgtcgttgggcct
gggttgaagttgcaccagtgtggcctgcccaagaaaatggccctggagctcttcaagccg
tttatttgttccaagcttaagatgtacggagtggcgccgacggtgaagcttgcaaacaag
atgatccagagcgaaaagcccgaggtttgggatgttttggacgaagtaataagggagcat
cccatattgctaaacagggctcctaccctgcacaggcttggtctccaggcgtttgacccc
gtacttatagaaggtaaggccatacagctgcatccgcttgtgtgtagtgcgtttaatgcg
gacttcgatggggaccaaatggcggtacacgtccctctgtcacttgaagcacagcttgaa
gccagggtgttgatgatgtccacaaacaacattcttagcccttcaaatggtaggccgata
atcgtcccgtccaaggatattgtcctgggaatatattacctcacgctgcaaagagcacaa
gcgcccgaccaggaggttatgtcttttggggaatttagccatgtggagtacgccctgcat
gaggggatagtacacacgtcttccaagataaaatacaggatgcagcgctgcaatagcgac
ggcacaatagtgagcgaggttgttgagacgaccccgggcaggctgattctctggcaaatt
tttccccagcacaaggatctcacgttcgatctcgtgaaccaggtgcttactgtgaaggag
attacatctatcgttgacttggtgtacaggagttgcgggcaaagggagacggtggagttt
tccgacaagctcatgtgtctgggttttcagtatgcgtcacagtctggtatctcttttggc
tgtaaagacatgataattccagacaccaaagcggcgcatgtggaaaatgcgagtgagaaa
attaaggagttttctatccaatatcaagacgggttgattacgaggagtgagcgctacaac
aaggtagtggatgagtggtctaagtgcacagacttaattgcccgggacatgatgaaagca
atctctttgtccgatgaggaagggaagctgaattccatttatatgatggcgaattccggt
gccaggggttcctcatctcagatgaagcagctggccggcatgcgtgggcttatggccaag
ccctcgggcgaaattatcgaaacccctatcatctcgaacttccgtgaggggttgagcgtg
tttgagtattttaattctacacacggggcgcgcaaggggctggctgacaccgcgttgaaa
accgcaaactccggatacctgacccgtaggcttgtggacgtggcgcaagactgtacagtt
gttgagtatgactgtaaaaccaaggatggcgtcgtcgccagggcggtgattgagggtggt
gccgtcgtagcgacgcttgacagtgtagtgctaggtagggttgctgcagtagacacttac
aaccctgtgactgaggaattgctattaagtgctggtgagctgatagacgaagggaaggtc
gagaaaataagagttgctgggttagatgcggtgagagtgcggtccccgctgacatgtgaa
tccaagaaagggatttgctcgttgtgctatggtagagaccttgctgttggggatttggta
tcgataggtgaggctgttggtgtaatagctgcgcagtctgtgggtgagcctggtacacag
ctgaccatgcgtacgttccacgttggtggtaccgcaatgcgcggggtggaggtatctaac
cttatagctgtgctggatgccgaggtgaaattggtgaacagcaacgtggtgaccgacaag
tacggcaatcagatagtgatgagtcggtcatgtgaggtagtgcttctcgacagcgttggt
aatgaaaagatgcggcacagcgtaccatacggtgcgaagctctatgtttcagatgggcag
ccggtcaaaatgatggacaaaatggccgagtgggacccatacactatacccattattacc
gagaagacgggaaccataaagtatgttgacctcatctacggtgtgtccatcaacgaagtt
ttggatgagtctacaggtatatcaaacagggttgttatagactggaagttgcatctccag
ggggcgaacttgaggccgaggttggtgctgttggatgaagatggcaacattgctacctta
tacaatgatctggaggcgagttacttcgtgcctataggcgcggtgctgaacgtccaagat
gggcagaaagtgcacgcgggggacgtcataactaggattcctagagaatccatcaagacc
agagacattaccggggggctgcccagagttattgagctgtttgaggcgcgccgtcccaag
gaacacgctattgtaagcgacgttgacggctacgttgagtttggcaaggattactatcgc
tccaagcgccggatattcatacggcctgtagacaaaagccttcctgcggtagaatatttg
gtgcccaagggtaagcacaccatagtgaacgagggtgactttgtgcacaagggtgatctg
ctcatggatggggatccggaccagcatgacatactcagagttttgggggcggaggctctg
gccagctacatgatttctgaaatacaacaggtatacagactgcaaggtgttaggatagac
aacaagcacatcgaggttatcctcaggcagatgctgcaaaaggtggaaatcactgatccg
ggtgacacaatgtacctggtgggtgagcatgctgggcgcgaggaggttatgcggctcaac
cgcaaactggaagaggctgggaagaagcctgttgcatatgtgccgattctccagggtatt
actaaagcgagtcttgataccaactccttcatttctgcggcgtcgttccaggaaaccacc
aaggtcctgaccgaagccgccttttcaggtaaggaagatcctctgtacggattgaaggag
aatgtaatcgttggtaggctaatacctgcgggtacagggttcattatgaacaaagtgaaa
aagctggcaatgctcgatcaaagcgactatgcaacttactataatagcgaattgcgagag
atcatgggtgacctgggtgacgaattaattgcggaaggtgaggcagcctccccgggccgc
agcggtgatggctatctggggaatggcgggggagttgtagattactag
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