KEGG   Amycolatopsis sp. BJA-103: BKN51_24245
Entry
BKN51_24245       CDS       T05296                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
amyb  Amycolatopsis sp. BJA-103
Brite
KEGG Orthology (KO) [BR:amyb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amyb03032]
    BKN51_24245
   03036 Chromosome and associated proteins [BR:amyb03036]
    BKN51_24245
   03400 DNA repair and recombination proteins [BR:amyb03400]
    BKN51_24245
DNA replication proteins [BR:amyb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BKN51_24245
Chromosome and associated proteins [BR:amyb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BKN51_24245
DNA repair and recombination proteins [BR:amyb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BKN51_24245
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AUI60990
UniProt: A0A2N8N374
LinkDB
Position
complement(5657478..5658143)
AA seq 221 aa
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGSKKLPKATAVKRATAGTTTRAAATRATTT
RTAASRPAATRTTTTRTRAAAATTRTAAKPAAKATATKAAAKPAAAKAAPKTAAKATTRA
TTAKKATATKAAAKPAAKATAAKAPAKKAPAKRTSAAAKKK
NT seq 666 nt   +upstreamnt  +downstreamnt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgcctgggcgacaagaaggtc
gcgtcggaggccgtcgatggccttgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgcccgcgccgcccgtaccgcg
cgtaacccgcgcaccggtgagaccgtccgcgtcaagaagaccaacgtgcccgctttccgc
gccggcacgaccttcaaggacgtcatcagcggttcgaagaagctgccgaaggccaccgct
gtgaagcgcgcgaccgccggcaccaccactcgggccgccgccacccgcgcgacgacgacc
cggacggccgccagccgcccggccgcgacgcgcaccaccaccacgcggactcgcgccgcc
gccgccacgacgcgcaccgccgcgaagccggccgccaaggcgaccgcgaccaaggccgcc
gccaagccggcagcggccaaggcggcgccgaagaccgcggccaaggccacgactcgcgcc
accacggccaagaaggcgaccgccaccaaggccgccgcgaagccggccgccaaggcgact
gccgccaaggctcccgccaagaaggctccggccaagcggacttcggcggccgcgaagaag
aagtaa

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