Amycolatopsis sp. AA4: CU254_08930
Help
Entry
CU254_08930 CDS
T05278
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03030
DNA replication
amyc03430
Mismatch repair
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CU254_08930
03430 Mismatch repair
CU254_08930
03440 Homologous recombination
CU254_08930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyc03032
]
CU254_08930
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_08930
Enzymes [BR:
amyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CU254_08930
DNA replication proteins [BR:
amyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CU254_08930
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CU254_08930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATY10569
UniProt:
A0A2K8LQ74
LinkDB
All DBs
Position
complement(1863626..1865344)
Genome browser
AA seq
572 aa
AA seq
DB search
METRPRPIQAQLAFDELGTPLRDTTFVVFDLETTGTKPGPDGITEIGAVKVRAGQVLGEF
ATLVNPGTPIPPQIVELTGITQAMVYDAPRIERVLPAFLEFISGAVLVAHNSGFDTSFMK
AACEGHGYVWPRPTVVCTVKLARRVIPREEARSYRLSSLSMLLGSRTRPTHRALDDARAT
TDVLHALLERVGNLGVHTVEELIDYLPDVTPAQRRKRNLAADLPSRPGVYLFKGPRDEVL
YVGTARDLRRRVRTYFTGSESRGRIREMVALAERVDAIECAHSLEAEIRELRLIAAHRPA
YNRRSKNPHHGWWISLTDEAFPRLSVVRLPRAGTLGPFRSQADARTAAETLADASGLRTC
TQRISATSASGTPCVLAELGRCGAPCAGRQTVAEYSPAVDAARGLIAGHDGRPLHLAAAR
LEEMSARRHYEQAARHRDELAGLVRAVGRAHRQAALASVAELIAAAPDGSGGWELSVIRY
GRLASAGVARRGVPPMPVVESLVAAGETVLPGDGPLRGAPGEEVGILLRWLARPGTRLVR
TTRPWAEPVAVAGWQSWLARVADARSLEHVAN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggagacccgaccgaggccgatccaggctcagctggcgttcgacgagctcggcaccccg
ctgcgggacaccacgttcgtcgtgttcgacctcgagaccaccggcaccaaacccggcccg
gacgggatcaccgagatcggcgcggtcaaggtccgcgccggacaggtgctgggcgagttc
gcgacgctggtcaacccgggcacgccgatcccgccgcagatcgtcgagctgaccgggatc
acgcaggcgatggtctacgacgcgccccggatcgaacgcgtgctgcccgcgttcctggag
ttcatctcgggcgccgtgctggtcgcgcacaactccggcttcgacaccagcttcatgaaa
gcggcctgcgagggacacggttacgtctggccgcgccccacggtcgtctgcacggtgaag
ctcgcgcgccgcgtcatcccgcgggaagaagcgcgcagctaccggttgtcgtcgctgtcc
atgctgctcggctcgcgcacccggccgacgcaccgtgcgctcgacgacgcccgcgccacc
accgacgtcctgcacgcgttgctggagcgcgtcggcaacctcggcgtgcacaccgtcgag
gagctgatcgactacctcccggacgtcacgccggcccagcggcgcaagcgaaacctcgcc
gccgacctcccgtcgcgaccgggcgtgtacctcttcaagggaccgcgcgacgaagtcctg
tacgtcggcaccgcgcgcgacctgagaaggcgcgtacggacgtatttcaccggttcggag
agccggggccggatccgggaaatggtcgcgctggcggagcgggtggacgccatcgagtgc
gcgcattccctcgaagccgagatccgcgaactgcggttgatcgccgcgcaccgcccggcc
tacaaccggcgctcgaaaaacccgcaccacggctggtggatcagcctcaccgacgaggct
ttcccgcggctttccgtggtccgcctgccgcgcgcgggcacgctcgggccgttccgcagc
caggccgacgcgcgcaccgccgccgaaactctcgccgacgcctccggcctgcggacctgc
acccagcgcatctcggccacctccgcgtccggcacgccgtgcgttctggcggaactcggc
cgctgcggagccccctgcgcgggcaggcaaaccgtcgccgagtactcccccgccgtggac
gccgcccgcggactcatcgccggccacgacggccgcccgctccatctggccgcggcgagg
ctggaggaaatgtccgcgcgaaggcattacgaacaagccgcccggcaccgggacgaactg
gccgggctggtccgcgctgtcggccgcgcacaccggcaggccgcgctcgcgtcggtcgcg
gaactcatcgccgcggccccggacggcagcggcggttgggaactgtcggtgatccgctac
ggcaggctcgcctcggccggagtggcccgtcgcggggtgccgccgatgccggtggtcgaa
tccctggtcgccgccggggaaacggtgctgcccggcgacggtccgctgcgcggcgcgccc
ggcgaggaggtcgggatcctgctgcggtggctcgcgcgtccggggacgcggctcgtccgc
accacccggccgtgggccgagcccgtcgccgtcgccggctggcaatcgtggctcgcccgg
gtcgccgatgcccggtcgctcgaacacgtcgcgaactga
DBGET
integrated database retrieval system
