Amycolatopsis sp. AA4: CU254_15140
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Entry
CU254_15140 CDS
T05278
Symbol
gabD2
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc00250
Alanine, aspartate and glutamate metabolism
amyc00310
Lysine degradation
amyc00350
Tyrosine metabolism
amyc00650
Butanoate metabolism
amyc00760
Nicotinate and nicotinamide metabolism
amyc01100
Metabolic pathways
amyc01120
Microbial metabolism in diverse environments
Module
amyc_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CU254_15140 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CU254_15140 (gabD2)
00310 Lysine degradation
CU254_15140 (gabD2)
00350 Tyrosine metabolism
CU254_15140 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CU254_15140 (gabD2)
Enzymes [BR:
amyc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CU254_15140 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CU254_15140 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CU254_15140 (gabD2)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ATY11646
UniProt:
A0A2K8LTD8
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All DBs
Position
complement(3195302..3196876)
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AA seq
524 aa
AA seq
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MTLTPVRPTRPATATDDFLRGLVARVPGSGGAVWPLTEVYTGDVLVDLPQSTPSDIEQAF
ATARAAQAKWAATPLKQRLAVFRRAHSLFIDRARTIADLIQVESGKNRRMAIEETCDPPM
IMSHYLRRAPKLLAPTRRGGPVPLVSSSTEIRVPKGVVGIIAPWNFPFATGISDAVPALM
AGNAVVLKPDNKTALSPLYGVQLLEAAGLPKGLFQVVCGEGPDVGPTLIDQADYVMFTGS
TATGKVIGERAGRNLIGCCLELGGKNPMIVLPDADFAEVVPGAVFGAFGNTGQICMHIER
IYLPESRYEEFKEAFVAKASSLDVRAAYDFGPEMGSLVSVDHLHRVKSHVDDAVEKGATV
LCGGRPRPDLGPAFFEPTILEGVTKDMLCGVTETFGPVVALHRYRTVDEAVELANDTDYG
LNASVWGKDLRAACAVAARLETGNVNVNDSLATAYAAKGTPSGGVKTSGVGARHGDQGLL
KYTDVQNLAVLKKPVMSPRPGQKYEKYVEGMLSGLKMMRRLRIR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaccccggtccggcccacccgcccggccacggcgaccgacgacttcctccgc
gggctcgtcgcgcgcgtgccgggctcgggcggggcggtgtggccgctcaccgaggtctac
accggcgacgtcctcgtggacctgccgcagtcgacgccgtcggacatcgagcaggccttc
gcgaccgcgcgggcggcgcaggcgaaatgggccgcgacgccgctcaagcaacggctcgcg
gtgttccgccgggcgcattcgctgttcatcgaccgcgcccggacgatcgccgacctgatc
caggtcgaaagcggcaagaaccggcggatggcgatcgaggaaacgtgcgatccgccgatg
atcatgagccactatctgcgccgggcacccaaactgctggctccgacgcggcgcggcggt
ccggtgcccctggtttcttcgtcgaccgagatccgggtgcccaagggggtcgtcgggatc
atcgcgccgtggaatttccccttcgccaccggcatttcggacgccgttccggcgttaatg
gcgggcaatgcggtggtcttgaagccggacaacaaaaccgcgttgtcaccgctgtacggc
gtgcaactgctggaagcggccggactgccgaagggcttgttccaggtcgtgtgcggcgag
ggcccggacgtcggcccgacactgatcgaccaggccgactacgtgatgttcaccggctcc
accgccaccgggaaggtgatcggcgaacgggcgggccggaacctgatcggctgctgtctc
gaactcggcggcaagaacccgatgatcgtgctcccggacgccgatttcgccgaggtggtc
ccgggcgcggtcttcggcgcgttcggcaacaccgggcagatctgcatgcacatcgagcgg
atctacctgccggagtcgcgctacgaagaattcaaggaagcctttgtcgccaaggcttct
tcgctcgacgtgcgggcggcttacgatttcggcccggaaatgggttcgctggtctcggtg
gaccacctgcaccgggtcaagtcccatgtggacgatgcggtcgagaagggagccaccgtg
ctgtgcggcgggcggccccggccggatctgggcccggcgttcttcgagccgaccattctg
gaaggcgtcacgaaggacatgctgtgcggggtcaccgaaacgttcggcccggtggtcgcc
ttgcatcgctaccggaccgtggacgaggccgtcgaactggcgaacgacaccgactacgga
ctgaacgcttcggtgtggggcaaagacctccgcgcggcttgcgccgtagccgcacgactg
gagacgggcaacgtcaacgtcaacgacagcctggcgaccgcgtacgccgccaagggaacc
ccgtccggcggcgtgaagacgtccggagtgggcgctcgccacggggatcaggggctgttg
aagtacaccgacgtgcagaacctggcggtgctgaagaaaccggtgatgagcccgcgccca
ggacagaagtacgagaagtacgtggaagggatgctgtccgggctgaagatgatgcgacgg
ctcaggatccggtag
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