Amycolatopsis sp. YIM 10: YIM_14600
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Entry
YIM_14600 CDS
T06270
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyy03021
]
YIM_14600 (sigB)
Transcription machinery [BR:
amyy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YIM_14600 (sigB)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QFU88106
UniProt:
A0A5P9PII7
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Position
complement(2961809..2962879)
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AA seq
356 aa
AA seq
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MSVQTLEREARGIRQRKIPKSVSDDTGTSSSSATSLDVPSTPPLAEGADLDAQSPAADLV
RVYLNGIGKTALLTAADEVEIAKRIEAGVFAQHMLDTAADLTPKRRAELSALVRDGAVAK
NHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYSKGFKFSTYATWWIR
QAITRGMADQGRTIRLPVHLVEQVNKLARIKRDLHQQLGREATNEELAAESGIAEHKIAD
LLDHARDPVSLDMPVGTEEDAPLGDFIEDSEATDAESAVISGLLQDDLRRVLATLDDREQ
HVIRLRYGLDDGQPRTLDQIGKHFGLSRERVRQIEREVMSKLRQGERADRLRAYAS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtccagactcttgagcgcgaagccaggggcattcgccagcgcaagattcccaag
tccgtttccgacgatacgggcacttcctcctcgagcgccacctcgttggacgtaccgagc
actccgccgctcgccgaaggcgccgacctggacgcccagagtccggccgccgacctggtt
cgggtctacctgaacgggatcggcaagaccgcgctgctcaccgcggccgacgaggtcgag
atcgccaagcgcatcgaggcgggcgtgttcgcccagcacatgctggacaccgccgcggac
ctcaccccgaagcgccgcgccgagctgtccgcgctggtgcgtgacggggcggtggccaag
aaccacctgctcgaggcgaacctgcgcctggtggtctcgctggccaagcgctacaccggc
cggggcatgccgctgctggacctgatccaggaggggaacctgggcctgatccgcgcggtg
gagaagttcgactactccaagggcttcaagttctccacctacgccacctggtggatccgc
caggccatcaccaggggcatggcggaccagggccgcaccatccggctgccggtccacctg
gtcgagcaggtgaacaagctggccaggatcaagcgcgacctgcaccagcagctcggccgc
gaggccaccaacgaggagctggccgcggagtcgggcatcgccgagcacaagatcgccgac
ctgctcgaccacgcgcgtgacccggtaagcctggacatgccggtgggtaccgaggaggac
gccccgctgggcgacttcatcgaggactccgaggccaccgacgccgagagcgcggtgatc
tccggcctgctgcaggacgacctgcggcgcgtgctggccaccctggacgaccgggagcag
cacgtgatccggctgcgctacggcctcgacgacggccagccgcgcacgctcgaccagatc
ggcaagcacttcgggctctcccgcgagcgcgtccgccagatcgagcgcgaggtcatgtcc
aagctgcgccagggtgagcgggccgaccgcctgcgggcctacgccagctga
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