Amycolatopsis sp. YIM 10: YIM_14910
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Entry
YIM_14910 CDS
T06270
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YIM_14910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyy03400
]
YIM_14910
Enzymes [BR:
amyy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YIM_14910
DNA repair and recombination proteins [BR:
amyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YIM_14910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
ABM
Motif
Other DBs
NCBI-ProteinID:
QFU88167
UniProt:
A0A5P9PK18
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All DBs
Position
3028122..3028751
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AA seq
209 aa
AA seq
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MATTAKTAAEFVPATKDLARLREAAAGCRGCDLYQDATQTVFGEGTRQARTMMIGEQPGD
QEDRRGEPFVGPAGRLLDRAMAESGIDRDGVYVTNAVKHFKFRRDERGSRRIHKKPGRTE
IVACRPWLDAELDAVNPDLVILLGATAAQAVFGPDFRITERRGEVLELPGGHDARAVATV
HPSSILRSRERDEAYAAFVADLKAAVAVL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccacggcgaaaaccgcggccgagttcgtgcccgcgaccaaggacctggcccgc
ctccgcgaggcggcggccgggtgccgcgggtgtgacctctaccaggacgcgacgcagacg
gttttcggtgagggcaccaggcaggcgcggaccatgatgatcggcgagcagcccggtgac
caggaggaccgtcgcggtgaaccgttcgtggggcccgccgggcgcctgctggaccgcgcc
atggcggagagcgggatcgatcgcgacggcgtgtacgtcaccaacgccgtcaagcacttc
aagttccgccgcgacgagcgcggctcccgccgcatccacaagaagcccgggcgcaccgag
atcgtcgcgtgccgcccgtggctcgatgcggaactcgatgcggtgaaccccgatctggtg
atcctgctcggggcgacggcggcgcaggcggtgttcgggccggacttccgcatcaccgaa
cgccgtggcgaggtactcgaactgcccggtggccacgacgcacgagccgtggccaccgtg
cacccctcgtcgatcctgcggtcccgcgaacgcgacgaggcctacgcggcgttcgtcgcc
gacctcaaggccgctgtcgcggtgctgtga
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