KEGG   Amycolatopsis sp. YIM 10: YIM_28210
Entry
YIM_28210         CDS       T06270                                 
Symbol
ykoV3
Name
(GenBank) putative DNA repair protein YkoV
  KO
K10979  DNA end-binding protein Ku
Organism
amyy  Amycolatopsis sp. YIM 10
Pathway
amyy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:amyy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    YIM_28210 (ykoV3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amyy03400]
    YIM_28210 (ykoV3)
DNA repair and recombination proteins [BR:amyy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     YIM_28210 (ykoV3)
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QFU90816
UniProt: A0A5P9PR34
LinkDB
Position
complement(5891079..5891930)
AA seq 283 aa
MRAMWKGSVSFGLVTIPIHLYAATENKNVSLRQVHEEDGGRIQYKRFCTIDGKEVPYSEI
AKGYELDDGEMVVITDADLAELPLSTSKSIDVLEFVPLESIDPIYFDRTYYLEPQKAMAK
PYVLLRDALHKSGHVAIAKVAVRQRESLALLRVIGDVLVMTTMLWPDEVRAADFGFLNEE
APQIRDQELAMAGSLIDSLSEPVFEQEKYRDHYREALEALIEAKAAGKETTAVPAPAEEG
EVVDLMAALQASVSEAKKSRKAETVAETTEKPKRKSTAKKKSA
NT seq 852 nt   +upstreamnt  +downstreamnt
atgcgcgcgatgtggaagggctcggtgtccttcgggctggtcaccatcccgatccatctg
tacgcggccacggagaacaagaacgtttccctccgtcaggtgcacgaggaggacggcggc
cgcatccagtacaagcggttctgcacgatcgacggcaaagaagtgccctacagcgaaatc
gccaagggctacgaactcgacgacggcgagatggtggtgatcaccgacgccgatctcgcc
gagctgccactgtccacttcgaagtcgatcgacgtgctggagttcgtgccgctggagtcg
atcgacccgatctacttcgaccgcacctactacctcgaaccgcagaaggcgatggccaag
ccgtacgtgctgctgcgcgacgcgctgcacaagtcgggccacgtggcgatcgccaaggtg
gcggtccgtcagcgcgagtcgctggcgctgctgcgggtgatcggcgacgtgctggtgatg
accacgatgctgtggccggacgaggtgcgcgccgcggacttcggcttcctgaacgaggag
gcgccgcagatccgcgaccaggagctggcgatggccggttcgctgatcgactcgctgtcc
gagccggtgttcgagcaggagaagtaccgcgaccactaccgcgaggcgctcgaagcgctg
atcgaggcgaaggccgcgggcaaggagaccaccgcggtgccggcgccggccgaggagggc
gaggtcgtcgacctgatggccgcgctgcaggccagtgtcagcgaggcgaagaagagccgg
aaggccgaaaccgtcgcggaaacgacggagaagcccaagcgcaagtccacggcgaagaag
aagagcgcctga

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