KEGG   Amycolatopsis sp. YIM 10: YIM_48250
Entry
YIM_48250         CDS       T06270                                 
Symbol
ddl2
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
amyy  Amycolatopsis sp. YIM 10
Pathway
amyy00470  D-Amino acid metabolism
amyy00550  Peptidoglycan biosynthesis
amyy01100  Metabolic pathways
amyy01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:amyy00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YIM_48250 (ddl2)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    YIM_48250 (ddl2)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    YIM_48250 (ddl2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:amyy01011]
    YIM_48250 (ddl2)
Enzymes [BR:amyy01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     YIM_48250 (ddl2)
Peptidoglycan biosynthesis and degradation proteins [BR:amyy01011]
 Precursor biosynthesis
  Amino acid ligase
   YIM_48250 (ddl2)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 ATP-grasp_3 RimK GARS_A
Other DBs
NCBI-ProteinID: QFU94775
UniProt: A0A5P9Q3G0
LinkDB
Position
10304174..10305118
AA seq 314 aa
MAERTVAVLAGGLSHERDVSLRSGRRLSAALRAEGLTVEEWDTDAGLLERLRTQRPDAAV
VALHGGQGENGSVQTVLEMLEVPFVGTSSQGCRRAWDKPTAKALLAKADFSTPDWVVLPH
STFRELGAQAVLDAMVDRLGLPLILKPDQGGSALGTQVVRDAAELPAAMVGCFAYGDTVL
AERFVDGVEVAVAVVETEAGPTALPAVEIVPESGVYDYTARYTAGLTDFFAPARLSEESA
KAVGELAVAAHQLLGLRDISRTDAVVGADGTVHFLEVNLSPGLTETSTVPMAIEASGGSL
GAVFAELIDRAIKR
NT seq 945 nt   +upstreamnt  +downstreamnt
gtggccgaacgcaccgttgccgtgctcgctggcggtctgtcccacgaacgcgacgtttcc
ctgcggtcgggcaggcggctgtccgccgcgctgcgcgccgaggggctgacggtggaggag
tgggacaccgacgccgggctcctcgagcggttgcgcacccagcggccggacgccgccgtg
gtcgcgctgcacggcggccagggcgagaacggctcggtgcagaccgtgctggaaatgctg
gaggtgccgtttgtcggcaccagctcgcagggctgccgccgcgcctgggacaagccgacc
gcgaaggcgttgctggccaaggcggacttctccacgccggactgggtggtgctgccgcac
agcaccttccgcgaactgggcgcgcaggcggtgctcgacgccatggtggaccgcctcggc
ctgccgctgatcctcaagccggaccagggcggctcggcactgggcacccaggtggtgcgc
gacgcggcggaactcccggccgcgatggtcggctgcttcgcatacggggacacggttctc
gcggagcggttcgtcgacggggtcgaggtcgccgtggcggtcgtcgaaaccgaagccggg
ccgaccgcgctgcccgcggtggagatcgtgcccgagagcggggtgtacgactacaccgct
cgctacaccgccgggctgaccgacttcttcgcgcctgctcgactttccgaggagtccgcg
aaggcggtcggcgaactcgcggtggcggcgcaccagttgctcggcctgcgcgacatctcg
cggaccgacgcggtcgtcggcgccgacggcaccgtgcacttcctcgaagtgaacctctcg
ccggggctcaccgaaacctcgaccgtgccgatggcgatcgaggccagcggcggttcgctc
ggcgcggtcttcgccgaactcatcgaccgcgcgatcaagcgctga

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