Amycolatopsis sp. YIM 10: YIM_48250
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Entry
YIM_48250 CDS
T06270
Symbol
ddl2
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00470
D-Amino acid metabolism
amyy00550
Peptidoglycan biosynthesis
amyy01100
Metabolic pathways
amyy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YIM_48250 (ddl2)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YIM_48250 (ddl2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
YIM_48250 (ddl2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amyy01011
]
YIM_48250 (ddl2)
Enzymes [BR:
amyy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
YIM_48250 (ddl2)
Peptidoglycan biosynthesis and degradation proteins [BR:
amyy01011
]
Precursor biosynthesis
Amino acid ligase
YIM_48250 (ddl2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QFU94775
UniProt:
A0A5P9Q3G0
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Position
10304174..10305118
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AA seq
314 aa
AA seq
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MAERTVAVLAGGLSHERDVSLRSGRRLSAALRAEGLTVEEWDTDAGLLERLRTQRPDAAV
VALHGGQGENGSVQTVLEMLEVPFVGTSSQGCRRAWDKPTAKALLAKADFSTPDWVVLPH
STFRELGAQAVLDAMVDRLGLPLILKPDQGGSALGTQVVRDAAELPAAMVGCFAYGDTVL
AERFVDGVEVAVAVVETEAGPTALPAVEIVPESGVYDYTARYTAGLTDFFAPARLSEESA
KAVGELAVAAHQLLGLRDISRTDAVVGADGTVHFLEVNLSPGLTETSTVPMAIEASGGSL
GAVFAELIDRAIKR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaacgcaccgttgccgtgctcgctggcggtctgtcccacgaacgcgacgtttcc
ctgcggtcgggcaggcggctgtccgccgcgctgcgcgccgaggggctgacggtggaggag
tgggacaccgacgccgggctcctcgagcggttgcgcacccagcggccggacgccgccgtg
gtcgcgctgcacggcggccagggcgagaacggctcggtgcagaccgtgctggaaatgctg
gaggtgccgtttgtcggcaccagctcgcagggctgccgccgcgcctgggacaagccgacc
gcgaaggcgttgctggccaaggcggacttctccacgccggactgggtggtgctgccgcac
agcaccttccgcgaactgggcgcgcaggcggtgctcgacgccatggtggaccgcctcggc
ctgccgctgatcctcaagccggaccagggcggctcggcactgggcacccaggtggtgcgc
gacgcggcggaactcccggccgcgatggtcggctgcttcgcatacggggacacggttctc
gcggagcggttcgtcgacggggtcgaggtcgccgtggcggtcgtcgaaaccgaagccggg
ccgaccgcgctgcccgcggtggagatcgtgcccgagagcggggtgtacgactacaccgct
cgctacaccgccgggctgaccgacttcttcgcgcctgctcgactttccgaggagtccgcg
aaggcggtcggcgaactcgcggtggcggcgcaccagttgctcggcctgcgcgacatctcg
cggaccgacgcggtcgtcggcgccgacggcaccgtgcacttcctcgaagtgaacctctcg
ccggggctcaccgaaacctcgaccgtgccgatggcgatcgaggccagcggcggttcgctc
ggcgcggtcttcgccgaactcatcgaccgcgcgatcaagcgctga
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