Amycolatopsis mediterranei RB: B737_1125
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Entry
B737_1125 CDS
T02804
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00860
Porphyrin metabolism
amz01100
Metabolic pathways
amz01110
Biosynthesis of secondary metabolites
amz01120
Microbial metabolism in diverse environments
amz01240
Biosynthesis of cofactors
Module
amz_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
amz_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
amz_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
B737_1125 (hemD)
Enzymes [BR:
amz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
B737_1125 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AGT81789
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Position
1197196..1198005
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AA seq
269 aa
AA seq
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MGELSGTAIGVTAERRAGEFIAALERYGAEVRHAPTITIVPLDADPELRAGTEATLAAPV
GFTVVTTGAGFRGWLDAAEGWELRDRLVAALGESRIYARGPKAVGAVRGAGLRESFSAAS
ESNAELFGALAAAGVRGERVAVQLHGTPLPELTDPLVRAGASLVQVQPYRWHSPPDVTPV
HDLIAAIVAGELDALAFTSAPAAANFLTLARTSGRYDELLAALRGPLVCACVGPVTAAPL
EAAGIETLQPDRQRLGALVKLLVTTLGTG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagctgagcggcaccgcgatcggcgtgacggccgagcgccgggccggcgaattc
atcgccgccctcgaacgctacggcgccgaggtccggcacgccccgacgatcaccatcgtg
ccgctggatgccgaccccgagctgcgcgcgggcaccgaagccacgctggcggccccggtc
gggttcacggtggtcacgacgggggcgggcttccgcggctggctcgacgcggccgaaggc
tgggagctgcgtgatcggctcgtggcagcgctgggggaatcccggatctacgcccgcggc
ccgaaggcggtgggcgcggtccgcggtgccggcctgcgcgagtccttttcggccgcctcg
gagagcaacgcggaactgttcggagcgctggccgcggccggggtccgtggcgagcgggtg
gccgtccagctgcacgggacgccgctgccggagctcaccgatccgctggtgcgggccggc
gcctccctggtgcaggtgcagccgtaccgctggcattcgccgccggacgtgacgcccgtg
cacgacctgatcgccgcgatcgtggcaggcgaactggacgcgttggccttcacgagcgcc
ccggccgcggcgaacttcctgacgctggctcgcacgtccggccgctacgacgagctgctg
gcggcgctgcgcggcccgctggtgtgcgcgtgcgtcggcccggtgaccgcggcccccctg
gaggcggcgggcatcgagacgctgcagccggaccgccagcgcctgggcgcgctggtgaaa
ctgctggtcacaacgctcggcacggggtag
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