Amycolatopsis mediterranei RB: B737_5469
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Entry
B737_5469 CDS
T02804
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00330
Arginine and proline metabolism
amz00480
Glutathione metabolism
amz01100
Metabolic pathways
amz01110
Biosynthesis of secondary metabolites
amz04148
Efferocytosis
Module
amz_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
B737_5469 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
B737_5469 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
B737_5469 (speC)
Enzymes [BR:
amz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
B737_5469 (speC)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Orn_DAP_Arg_deC
Acetyltransf_CG
Motif
Other DBs
NCBI-ProteinID:
AGT86133
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Position
6154215..6155825
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AA seq
536 aa
AA seq
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MRAALTRATHDQLVYDLTGIERQYHALLDELPDVSVRFAVKACPHPAVLACLARVGAGFD
AASPGEIELTLRNGALPDDVHYGNTVKSDADIAAAHSLGITTFATDCVQDVRAIARHAPG
AHVFCRVTTTGDGALWPLTGKCGSDDAVGVLTEARRLGLVPAGLSIHVGSQQMTASAWRQ
ALDTLVALVTSLAAQGIQLGHVNLGGGLPAHGYLSKDGVPLVPPTGEIFTAIREGMGRLR
EAGGRLRFLVEPGRHLVADHGTIRAHVARLTSRGRRWLYLSCGKFNGLYETDQVRYRLTF
PGQAGGAEVPAMVAGPTCDSDDSFGGGPVVVPADLASGDPVWIHSTGAYAIGYTTVGFNG
FRPLPVLAVRTEKIRPIDAGDWTTIAELEAAEYAPRGLSESRAVLESRWAKETSFVLDRG
ERLGGYVLALPYPPYRVPDPGLPETTAFHSANLHLHDIVVSAELRGRGWGARMLRHVTEA
AQSLRYTRISLVAVDGATGFWSAQGFHAHPEVALPAGYGPGAVYMSRPVTGESAAP
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggccgcactgaccagagccacgcacgaccagctcgtctacgacctgaccggcatc
gagcggcaataccacgcgctgctcgacgaactgccggacgtttcggttcgcttcgccgtg
aaggcgtgcccgcaccctgcggtgctcgcctgcctcgccagggtgggcgcgggcttcgac
gcggcgagtcccggcgagatcgagctgacgctgcgcaacggggcgcttccggacgacgtc
cactacggcaacaccgtgaagtccgacgccgacatcgccgccgcgcactcgctcggcatc
accaccttcgcgaccgactgcgtccaggacgtgcgggcgatcgcccggcacgcccccggc
gctcacgtgttctgccgggtcaccacgaccggcgacggcgcgctgtggcccctgaccggc
aagtgcggcagcgacgacgccgtcggcgtgctgaccgaagcacggcgcctcgggctggtc
ccggccgggctgtcgatccacgtcggctcgcagcagatgacggcctcggcgtggcggcag
gcgctggacaccctggtcgccctcgtgacctcgctggcggcacagggcatccagctgggc
cacgtgaacctcggcggcgggctccccgcgcacggctacctcagcaaggacggtgtcccg
ctggtgccgccgaccggagagatcttcaccgccatcagggaaggcatgggccggctgcgc
gaagcgggcggccggctgcgcttcctggtcgaaccggggcggcacctcgtcgccgaccac
gggacgatccgcgcgcacgtcgcccggctcacctcccgcggccggcggtggctctacctc
agctgcggcaagttcaacggcctctacgagaccgatcaggtgcgctaccgcctgacgttc
cccgggcaggccggcggggccgaggtgcccgccatggtcgcgggcccgacctgcgacagc
gacgacagcttcggcggcggccccgtcgtggtgcccgcggacctggcctccggcgatccg
gtgtggatccactccaccggtgcctacgccatcggctacaccactgtggggttcaacggg
ttccggcccctgccggtcttggccgtgcgcacggagaagatccggccgatcgacgcgggc
gactggaccaccatcgccgaactggaagcggcggagtacgcaccgcgggggttgtcggag
agccgtgccgtcctggaatcccgctgggccaaggaaacctccttcgtgctggaccggggc
gaacggctgggcggctacgtgctcgccctgccctacccgccgtaccgcgtccccgatccc
ggcctgcccgagaccaccgccttccactcggcgaacctgcacctgcacgacatcgttgtc
agcgccgaactgcgggggcgtggctggggagcgcggatgctgcggcacgtgaccgaggcc
gcccagtccctccgctacacgcggatctccctggtcgccgtcgacggcgccaccggattc
tggtcggcacaggggttccacgcgcatcccgaggtggcgctgcccgccggctacggaccg
ggtgccgtctacatgtcccgcccggtcaccggcgaaagcgctgccccgtga
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