KEGG   Aspergillus niger: ANI_1_2644024Help
Entry
ANI_1_2644024     CDS       T01030                                 

Gene name
An02g06890
Definition
(RefSeq) DNA ligase 3
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ang  Aspergillus niger
Pathway
ang03030  DNA replication
ang03410  Base excision repair
ang03420  Nucleotide excision repair
ang03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ANI_1_2644024 (An02g06890)
   03410 Base excision repair
    ANI_1_2644024 (An02g06890)
   03420 Nucleotide excision repair
    ANI_1_2644024 (An02g06890)
   03430 Mismatch repair
    ANI_1_2644024 (An02g06890)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ang03032]
    ANI_1_2644024 (An02g06890)
   03400 DNA repair and recombination proteins [BR:ang03400]
    ANI_1_2644024 (An02g06890)
Enzymes [BR:ang01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ANI_1_2644024 (An02g06890)
    6.5.1.6  DNA ligase (ATP or NAD+)
     ANI_1_2644024 (An02g06890)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ANI_1_2644024 (An02g06890)
DNA replication proteins [BR:ang03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    ANI_1_2644024 (An02g06890)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     ANI_1_2644024 (An02g06890)
DNA repair and recombination proteins [BR:ang03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ANI_1_2644024 (An02g06890)
   NER (nucleotide excision repair)
    Other NER factors
     ANI_1_2644024 (An02g06890)
   MMR (mismatch exicision repair)
    Other MMR factors
     ANI_1_2644024 (An02g06890)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 4979178
NCBI-ProteinID: XP_001399823
UniProt: A5AA81
LinkDB All DBs
AA seq 834 aa AA seqDB search
MSSPAKKRKRDDPGSTPQRSRSIASFFQGQAAKQAEKTQQAFDAVPEVPTEQTLSDEALA
RKLQAEWDQEHALSNPQVDTPSDEPISAQSITGDNDREPAKVQKKGVLSLQSSTGTEDTV
SLAVPFDQSPITFDASKYAHELQGHWASEGGDASYALLTRAFVLANATTSRIKIVDTLVN
FLRVLIEADPSSVLPAVWLATNSISPPYDELELGLGGSSISKALKKVYGLNSQGLKTLYD
KHGDAGDVAFEAKKRQSFTLMKPKPLRIKGVYQSLKKIAMSKGSGSQETKQRIVEKLLQD
ARGAEESRYIVRTLVQNLRIGAVKTTMLIALARAFLYSKPEGAGFSIYSQREMAQMKKEE
LAEIYGNAEEIVKASYARHPDYDDLVPCLLEVGATDELLVRCGLQIHIPLRPMLGSITRD
LSDMLTKLQGRDFSCEYKYDGQRAQVHCDVQGKVSIFSRHLENMTEKYPDLVSLVPEIRG
EGVSSFILEGEVVAVDQETGELQAFQILTNRAKKNVDIGAIKVNVCLFAFDLMYLNGQPL
LDRSFRERRELLRSLFVEIPKRFTWVKSLDATSADSEAVLEFFKSATDTKCEGIMVKVLD
NMPKPDLEGIDTPAVDTSNGTPTTPGQPTTNMTDNKPSKNTRRKALLSTYEPDKRLESWL
KVKKDYSTSSETLDLIPIAGWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKF
YQANKDKYAEGTPNVISRPSYVEYYGEPDVWFEPQEVWEMAFADITLSPTYTAALGLVSD
ERGLSLRFPRFLKVREDKSIDEATTSDYLAYLWRKQSERTKQEGGEPLAEEQEE
NT seq 2505 nt NT seq  +upstreamnt  +downstreamnt
atgtccagtccagctaaaaaacgcaagagggatgatcccggatctacaccccagcgctcc
cggagcatagcgtcgttcttccagggccaggcagccaagcaagccgagaagacgcagcag
gcatttgatgctgtgcccgaagtccccacggaacaaactctgtcagacgaggcgcttgct
cgtaagctgcaggccgaatgggatcaggagcatgcgctttcaaatccgcaagtcgacacg
cctagtgatgagcctatttcggcacaatcaatcacaggcgataacgatcgggaaccggcc
aaagtgcagaagaaaggcgtcctgtcactgcagtcatccacaggcacggaggacactgta
tctcttgcagttcctttcgatcagagtcctatcacgttcgatgcctccaaatatgcgcac
gagctgcaaggacactgggcttcggaaggtggcgacgcttcatacgccctcctgaccaga
gcttttgtgctcgcaaatgccacaaccagtcgcatcaagatcgtcgatacattggtcaat
tttctccgcgtgttgattgaggccgacccgtccagtgtgcttcccgctgtatggcttgcg
actaattcaatatccccaccatacgacgaattggagcttggacttggcgggtcctcgata
tcaaaagcgctcaaaaaggtgtacggactgaacagccaaggccttaaaactctgtacgac
aagcacggcgatgctggcgacgtagcattcgaggccaagaagagacagtcttttacattg
atgaagcctaaaccgcttcgaatcaaaggtgtctaccagtcgctcaagaagatagctatg
agcaaagggagtggaagccaggagacaaagcaaaggatcgtcgagaaacttctgcaagat
gcccgtggtgcggaagagagtcggtacattgttagaactctggtccaaaatctacgcatc
ggcgctgtcaagactaccatgctcattgcactggctagagcattcctttactccaaacca
gagggagcgggattctcaatctactctcagcgggaaatggcacagatgaagaaagaggag
ctagctgagatctacggcaacgcagaagagatcgttaaggcgtcgtatgcgagacacccg
gactacgatgacctcgtcccctgcttgcttgaagtcggagctacagatgaacttcttgtc
cgctgtggtcttcagatacatattccgttgagacccatgctaggcagcatcacgcgggat
ctgtcagatatgctaacgaagctgcaagggcgcgatttcagctgtgaatacaaatatgac
gggcagcgtgcgcaagtgcattgcgatgtacaaggcaaagtatcaatattctcccgtcac
ttggagaatatgacggagaaatacccagacctggtgtctcttgtcccagagataagagga
gaaggcgtatcaagcttcatcctcgaaggggaggtagttgccgttgatcaagaaacgggg
gaactacaggcttttcagatcctgaccaatcgcgcgaagaagaacgtcgatatcggagca
atcaaagtcaacgtgtgtctgtttgcctttgacctaatgtacctgaacggccaaccacta
ctcgaccgatcattccgcgagcgaagagagctgctacggagcttattcgtggaaattccc
aaacggttcacctgggtgaagagtctcgacgccacctcagccgactccgaagcagtatta
gagtttttcaagagtgccacagacaccaaatgcgaaggcatcatggtcaaagtgctcgac
aacatgccaaaacctgatctcgaaggaattgacacaccagctgtcgacacttccaacgga
acacccaccacacccggccaaccaaccaccaacatgacagacaacaaaccctccaaaaac
acccgccgaaaagccctcctctccacctacgagcctgacaagcgcctcgaatcctggctc
aaagtcaaaaaagactacagcacttcatcagaaactctggacctaatccccatagccggc
tggcacggccaaggccgcaaagcgaaatggtggtcaccgatcctccttgcggttcgaaac
ccagaaaccggaagtctcgaagccgtaacgaagtgcatgtcgggcttcacggacaaattc
taccaagccaacaaggacaagtacgcggagggtacccccaacgtcatctcccgccccagc
tacgtcgaatactacggcgagccggacgtgtggttcgaaccgcaggaagtttgggagatg
gccttcgcagatatcacgctgagtcctacgtacacggccgctctgggattagttagcgat
gaacggggtctgagtttgcggtttcctcgatttctcaaagtcagagaggataaatcgatc
gatgaggcgaccacgtctgactatctggcttatttgtggaggaaacagtcggaacggacg
aagcaggaggggggtgagccattggctgaggagcaggaagagtaa

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