Acinetobacter nosocomialis: RR32_03185
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Entry
RR32_03185 CDS
T04196
Name
(GenBank) Fis family transcriptional regulator
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ano
Acinetobacter nosocomialis
Brite
KEGG Orthology (KO) [BR:
ano00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ano03016
]
RR32_03185
Enzymes [BR:
ano01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
RR32_03185
Transfer RNA biogenesis [BR:
ano03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
RR32_03185
Prokaryotic type
tRNA splicing ligases
RR32_03185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AJB47167
LinkDB
All DBs
Position
complement(659034..660239)
Genome browser
AA seq
401 aa
AA seq
DB search
MGIQKILNEEALYGVPVKIFTQDIDSESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLQPIIKKHPGLIRMLRQFDATWQKQLGTLGGGNHFIELCIDENQDVWI
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSNSFNDYVEAVEWAQEY
AFENRKEMMRLVLEAIRPLLPSFQMTKEAINCHHNYVSRETHFGENLLVTRKGAIRAGLN
ELGIIPGSMGARSYIVRGKANPESFCSCSHGAGRKMSRSKAKILFNQQDLIEQTQGIECR
KDSGVVDEIPSAYKDIDEVMANQSDLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatattaaacgaagaggcactctatggtgtccctgttaaaattttc
actcaagatatagatagtgaaagtatcgaacaactcaagaaaatggcacagctgcaattt
atatattcacatattgctgttatgccagatgttcatgtaggaaaaggtgcgactgtaggc
agtgtcatcccgactaaacatgccattattccagcagcagtcggtgtagatattggctgt
ggaatgaatgcaattcgtttgagtctaaaggcttcacaacttcctgataacttaagtcga
ttacgtgatgcaatcgaacgtaaagtacctgtcggttttgctttgcataaacaggtcaaa
gctaaagcgtcgagtattattccactcgaaaaacgcttacaaccgattataaagaagcac
ccaggtctaattcgcatgcttcggcagtttgatgcgacttggcaaaaacaattaggcaca
ctaggaggtggtaatcactttatagagttatgtattgatgaaaatcaagatgtctggatt
atgctgcattcaggtagccgaggtctggggaacgtcattggtacttattttattgagctc
gccaagaaagaagcacaacatcgctttggacatgtacctgataaagacttaagttatttt
gctgaaggttcaaacagttttaatgattatgtagaagctgtggaatgggcacaagaatat
gcttttgaaaatcgcaaagaaatgatgcgattagtcttagaagcaattcgacctcttcta
ccttcatttcaaatgacaaaagaagcgattaattgtcatcataattatgtgagtcgagaa
acccattttggtgaaaatcttttagttaccagaaaaggagcgattagagcgggtttaaat
gagttaggaattattccaggttctatgggagcacgttcttatattgttagaggaaaagct
aatcctgagtctttttgttcttgctctcacggagctggccgcaaaatgagccgaagcaag
gcaaaaatactttttaatcaacaagacttaattgaacaaacgcaaggaattgaatgtcgt
aaagacagtggtgttgtcgatgagattccaagcgcttataaggacattgatgaagttatg
gcgaaccagtcagatcttattgaagtggtccatacacttaaacaagttttatgtattaaa
ggttaa
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