Acholeplasma oculi: Aocu_12140
Help
Entry
Aocu_12140 CDS
T03695
Symbol
polC
Name
(GenBank) DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
aoc
Acholeplasma oculi
Pathway
aoc03030
DNA replication
aoc03430
Mismatch repair
aoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aocu_12140 (polC)
03430 Mismatch repair
Aocu_12140 (polC)
03440 Homologous recombination
Aocu_12140 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoc03032
]
Aocu_12140 (polC)
03400 DNA repair and recombination proteins [BR:
aoc03400
]
Aocu_12140 (polC)
Enzymes [BR:
aoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aocu_12140 (polC)
DNA replication proteins [BR:
aoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aocu_12140 (polC)
DNA repair and recombination proteins [BR:
aoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aocu_12140 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
CAF1
tRNA_anti-codon
DNA_pol3_a_NI
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CDR31287
UniProt:
A0A061AJW9
LinkDB
All DBs
Position
1:complement(1325904..1330415)
Genome browser
AA seq
1503 aa
AA seq
DB search
MSNKFDLFLQQAQLNTYPMNSAKLEQVIVSKRNKSLMFMITFDELLAPNQMSLFINQLET
FFKKPEIVEKIDYQFRYKKIDLTAHHRAYFEMVVHRAGEFFPPLLIFKNYPVDFMNGTYS
ISIDKDSKGLKKYFPDLMRYFKQLGIDVSFELKLSEVLTPVTEEVNRYIDEQFESLEKLV
KTPDTIILDQKTTFSRKSSPQAVGIKEIPATNYELDKYKHEKGDVNFLIEGEVFKHEFRE
LKNTNLLTISIFDQDDAITVKRFVKAPKDIQLAKEIKVGDVVQVSGDAQYDTFQKEVVIF
ARAFYQIERPKKQERTDKAKEKRIEFHIHTKASPMDAVTSVEDYVETLEKWGHEAFAITD
HNGLYAYPDIHKATKGKKIKPIYGVELDYVDDEAFKIAFDYPNDFSLKDATYVVFDIETT
GLSHTRDKIIEIAAYKIKNGFIGERFEEFVDPEEKLSDLTIRLTNITDDMVQGKDTIDKV
LPRFLEFIKGSVLVAHNASFDVGFIYEQSKKLNLSHEIFPVIDTLNIARYYYNSTQKDKN
HARFYKTDSGNIPDLKRFNLKAVTKFFKVNLDAHHRAIYDAYATAEVFLHMLTNFYKEEI
VTYFELNASLDMDEVWRHPIPKYALILAKNQKGYKNLFKLISDALTTHFDGGARLLKSVY
EELKDGLLIGSGSEFGEVFEAALNLNTERLKEAIEFYDYIEVHPLPAYQHIIHELGPLGK
EVLQAAIKSIIEIAKSLGKIVIATSNAHYLNPDDKKYRDIYIHTKSVGGGLHPLANYEVS
PNQHLLTTQEMLDQFHFLDPETAYEIVVTNTRKLNDMIEPIQAFPKELYSISDDAFKDTL
GIPSIQVHVKKMVYDRAHQLYGNPVHPYVEKRIEKELKNIIENQFAPIYFVSHLLVKKSL
DDGYLVGSRGSVGSSLVATLLDITEVNPLRPHYRCPNGDYSVFKMTDEEIYEKGVDKIDE
PYVELLKHVGSGYDLPNETCPICGAQLVKDGHDIPFETFLGFDGDKVPDIDLNFSGDYQS
KAHEYVKELLGEDYSFRAGTIQTVAERNAYGYVKGYLEYLGKEARSAYIERMAKGIEGAR
RSTGQHPGGIVVVPKHKTIYDVTPVQYPADDVNSLWKTTHFDYHSFEDNLLKLDILGHDD
PTMIKFLMDYVYKHPNDFPFNRAQDIPLDDHEVYKLFQGTDVLGFKGDEVYGDIASYAIP
EFGTGFTRQMLQDTKPKTFAGLVKISGLSHGTDVWLKNSQELVLGKTQFGKISFDDVIGC
RDDIMVELSARGMPANKAFEIMEFVRKGKPSANPKKWSEYEALMKVSKIPDWYIWSASQI
KYMFPKAHATAYVIMAMRIAWFKVHKPLLFYSGFFSKRAVQFEHDTMVAGYNAIRNRINH
LKQTNNLTAKDEDVLVTLFVALEMTKRGFKFLPVHIKKSEALEFVMEKDGLRMPFVSIDG
LGTQAAIDVVNNRLERPFRSKEDVKSRTKLNKTVFEKLDLIGSFDELESSNGEIESGLFA
YKY
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaatttgatttatttttacaacaagcacaactcaatacatatccaatgaac
tcagcgaaacttgaacaagtcattgtatctaaaagaaataaatctttgatgtttatgatt
acatttgatgaattactcgcacccaatcaaatgagtttgtttatcaatcaattagagact
ttctttaaaaagcctgagattgtagaaaaaattgattatcaatttaggtataagaaaatt
gatttaaccgcacatcaccgtgcatattttgaaatggttgttcaccgtgcaggagaattt
ttcccaccactgcttatttttaaaaattatcctgttgactttatgaatggtacatattca
attagtatcgataaagacagtaaaggattaaaaaaatattttccagacttaatgagatat
tttaagcaactaggaattgatgtatcgtttgaattgaaactaagtgaggtattaactcca
gtaactgaagaagtaaaccgatatattgatgaacaatttgaatctttagaaaagcttgtg
aaaacaccagatacaatcattttagatcaaaagacaacattcagtagaaaatcatctcct
caagctgttggaattaaagagattcctgcaacaaattatgaacttgataaatacaaacac
gaaaaaggggatgtaaactttttaatcgaaggcgaagtttttaagcatgaatttagagaa
cttaaaaatacaaatcttttaactatttcaatttttgatcaagatgatgcaattacggtt
aaaagattcgttaaagcacctaaggacatacaacttgcaaaagagattaaagtaggagat
gtagttcaagtttcaggagatgcacagtatgatacattccagaaggaagttgttattttt
gcacgtgcattttatcaaatagaacgtcctaaaaaacaagaacgtacggataaagcaaaa
gaaaagagaattgaatttcatatccatactaaagcatctccaatggatgcagtaacaagt
gtagaagattatgttgagacacttgaaaaatggggacatgaagcatttgcaattacagac
cataatgggttatatgcttatccagatatacataaagcaacgaagggtaagaagattaaa
ccgatttatggagttgaattagactatgtggatgatgaagcttttaaaatagcttttgat
tatccaaatgatttttcattgaaagatgcaacctatgtagtctttgatatagaaacaaca
ggtctttcacatacaagagacaaaatcattgaaattgctgcatataaaattaagaatggt
tttattggagaacgttttgaggagtttgtggaccctgaggaaaaattatctgatttaacc
attcgattaaccaatattacagatgatatggttcaaggtaaagatacaatagataaagta
ttacctagatttttagaatttattaaggggtcagttttggttgcacataatgcatcattt
gatgttggatttatctatgaacaatccaaaaaattaaatttatcacacgagattttccca
gtaattgatacacttaatattgcaagatactactataactcaacccaaaaagataaaaac
catgcaaggttttataaaacagattcgggtaatattcctgatttaaaacgatttaattta
aaggctgtaacgaagttctttaaagtcaatttagatgcacatcaccgagcaatttatgat
gcttatgcaacagcagaagtctttttacatatgttaacaaatttctataaagaagagatt
gttacatattttgaattaaatgcgagtttagatatggatgaggtttggagacatccaatt
ccaaaatatgcattaattctcgctaaaaaccaaaagggttacaagaatttatttaagtta
atatcggatgcgttaactacacattttgatggtggtgctagattattaaaaagtgtttat
gaagagttaaaagatggactattaattggtagtggttcagaatttggtgaagtatttgaa
gcggcattaaatttaaatacagaaagactcaaagaagctattgaattttatgattatatc
gaagtacatccattacctgcatatcaacatatcattcatgagttaggaccactaggtaaa
gaggttttacaagctgcaattaagtcaattattgaaatagctaaatcattaggtaaaatc
gttattgcaacatccaatgcacattacctcaatccggatgataaaaaatatagagacatc
tatattcatacgaaatctgtaggtggtggacttcatccacttgcaaactatgaagtatca
cctaatcaacatctattaacaactcaagaaatgctcgatcaatttcattttctagatcca
gaaacggcttatgaaattgttgtaacaaacacaagaaaactaaatgatatgattgaaccg
attcaagcatttccaaaagagttgtattcaatatcagatgatgcttttaaagatacatta
ggtataccaagcattcaagtgcatgttaagaagatggtttatgatagagcacatcagtta
tatggaaaccctgtacatccttatgtagaaaaaagaattgaaaaagaacttaaaaacatt
atagaaaatcaatttgcaccgatatattttgtatcgcatttattagttaaaaaatcactt
gatgatggatacttggtaggttctagaggatccgttggttcttctttagtagcgacttta
ttagacattactgaggttaatccgttaagaccacattatcgttgccctaatggtgattat
tctgtgtttaaaatgaccgatgaagaaatctatgaaaaaggtgtcgataaaatagatgaa
ccttatgtggaattattaaagcatgtgggttcaggatatgatttacctaacgaaacctgt
cctatttgtggtgcacagcttgttaaagatgggcacgatattccgtttgaaactttcctt
ggatttgatggagataaagttccggatattgatttaaattttagtggagattatcagtct
aaagcacacgaatatgtaaaagaattattaggggaagattattcatttagagctggaacg
attcaaaccgttgcagaaagaaatgcatatggttatgtaaaagggtatttagaatattta
ggaaaagaagcaagatctgcatacattgaacgtatggctaaaggaatagagggagcaaga
cgatcaaccggtcaacacccaggtggaatcgttgttgttcctaaacataaaacaatttat
gatgttacacctgttcaatatcctgccgatgatgttaattcgttatggaaaactacacac
tttgattatcattcatttgaagataacttattaaaattagatatattaggccatgatgac
ccaaccatgattaaattcttgatggattatgtttataaacaccctaatgattttccattt
aatagagcacaagacattccactggatgaccatgaagtctataaacttttccaaggcact
gatgtattaggatttaaaggtgatgaagtatatggagatattgctagttatgcaattcct
gagtttggcacaggttttacgcgacaaatgcttcaagatacaaaacctaaaacatttgct
ggattggttaaaatatctggattatctcatggtacagatgtatggcttaaaaactcacaa
gaacttgtattaggtaaaacacaatttggaaaaatttcttttgatgatgtcattgggtgt
cgtgatgatattatggttgaattatccgctagaggtatgcctgcaaataaagcttttgag
attatggagtttgttcgtaaaggaaaaccttcagctaaccctaaaaaatggtcagagtat
gaagcattgatgaaggttagtaaaatacctgattggtatatttggagtgcatcacaaatc
aaatatatgtttccaaaagcacatgctacagcttatgtgattatggctatgagaattgct
tggtttaaagtacataaaccattactcttttattcaggcttctttagtaaacgagcagtt
caatttgaacacgatacaatggttgccggatataatgcaataagaaaccgaattaatcat
ttaaaacaaaccaataacttaaccgctaaagatgaagatgtattagttactttatttgtt
gctcttgaaatgacaaaaagagggtttaaattcttaccagtacatatcaaaaagtcagaa
gcgttagaatttgttatggaaaaagatggacttagaatgccttttgtctctatagatgga
cttggaacacaggctgcaattgatgttgtgaataaccgtttagagcgtccatttagatct
aaagaagatgtaaaatctcgaactaaattgaataaaacagtctttgaaaaattagacctt
attggatcatttgatgagctagaatcatcaaatggtgaaattgaaagcggtttattcgcc
tataaatactaa
DBGET
integrated database retrieval system
