Asparagus officinalis (garden asparagus): 109833117
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Entry
109833117 CDS
T05243
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109833117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109833117
Spliceosome [BR:
aof03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
109833117
Complex B
109833117
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
109833117
NCBI-ProteinID:
XP_020256258
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Position
3:14732072..14758092
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AA seq
501 aa
AA seq
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MGDYNDPFMRNKDAAVQARTKAQNRANVLQLKLIGQSHPTGLTTNLLKLFEPRPPLEFKP
PPEKKKSLPYTGMAQFVSHFAEPGDPEYAPPVKKAETPAERRARIQKIRLEKGAEKAAEE
FQKYDPHKDPNVTGDPYKTLFVARLNYETSEHRIKREFEAYGPIKRVRLITDKETNKPRG
YAFIEYAHTRDMKTAYKQADGRKLDNKRVLVDVERGRTVPNWRPRRLGGGLGSTRIGGED
LNQKNSGREQQQIASGGHRRSEEPRVREDRHVDRDREKSRERGRDRERERERSHDRLRDR
EPREDRHHHHRDRERTREREREKDRGRDRDSRRGRDRERDHGRDRERDRLRDKDRDRDRD
YERASHERDREYDQVEPMHDQERPSTRDRELEPGEHEYGREYYDEGFQPQPDGPTETDHR
RERAKQPGYYDDGYRGVHFDQGDPEAREEGEAVAEHDYGYQXXXXTSDQKDPSLASMIAE
VRQGKVFSKHLGLKMVPIFAC
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggagattacaatgatccgtttatgcgcaataaggacgcggccgtccaggcccgaacc
aaggcccagaatcgcgccaacgtcctccaattgaagctgattggtcagagtcatccaact
ggtcttactaccaaccttttgaagctcttcgaacctcgccctcctttggagtttaagcct
cctccggagaagaagaagtcccttccctatacagggatggcgcaatttgtgagtcatttt
gctgagccaggtgatcctgaatatgccccaccagttaagaaggcggaaactccggcagaa
agaagagcaagaattcagaaaattcgacttgaaaaaggtgctgaaaaggctgctgaagag
ttccagaaatatgatccacataaagacccgaacgtaactggggatccatacaagacattg
tttgtggcaagacttaattatgaaacatctgaacataggatcaaaagggagtttgaagct
tatggcccaatcaaaagggtcaggttgattactgacaaggagacaaataaacctcgagga
tatgcttttatcgaatatgcacacacgagagacatgaaaactgcatataaacaagctgat
gggaggaagttggataataaaagagttcttgtggatgttgagcgtggtagaactgttcca
aattggcgacctcgaagactgggtggtggacttgggtcaaccaggattggaggcgaagac
cttaatcagaagaattccggaagggaacaacagcaaattgcatccggaggtcatcgtcga
tccgaagagccaagagtgcgtgaagaccgtcatgttgaccgagacagggaaaagtcccga
gagagagggagggacagggaacgggagagggagagatctcatgataggttacgagataga
gagccaagggaagacaggcaccatcatcacagagatcgggagaggaccagggagagggag
agggaaaaggatcgcggtcgtgaccgtgacagtcgtcgtggcagagacagggagagagac
catggacgtgaccgtgaacgtgatcgccttcgtgataaggatcgagatcgcgacagagac
tatgaacgtgctagccatgaaagggaccgggagtatgatcaagtagagccaatgcatgat
caagagcggcctagcaccagagacagagaacttgaacctggtgagcatgaatatggaaga
gaatattatgacgagggctttcaacctcagcccgatggtcccaccgaaactgaccatcgc
agggagcgggcaaagcaacctggatattatgacgatggctatcgcggggtacattttgac
cagggagatcccgaggcacgagaggaaggtgaggcagttgctgagcatgattatggttac
cagnnnnnnnnnnttaccagcgatcagaaagatccctctctcgcgagtatgatcgctgag
gtcagacaagggaaggtcttcagcaagcatcttgggttaaaaatggttccaatctttgct
tgctga
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