Asparagus officinalis (garden asparagus): 109835682
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Entry
109835682 CDS
T05243
Name
(RefSeq) probable polygalacturonase At1g80170 isoform X1
Organism
aof
Asparagus officinalis (garden asparagus)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Beta_helix
DNA_ligase_OB
Motif
Other DBs
NCBI-GeneID:
109835682
NCBI-ProteinID:
XP_020259263
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Position
3:107002103..107015608
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AA seq
450 aa
AA seq
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MASSSASQISLLFVVFVGVLLLSSTVVDGFASGLKLPSSRARSRGRQWTNLTLSVSHFGA
RGDGCGDDTQAFVEAWKRACSSRALAVIEIPADYVCLIRPIQLGGPCKGKITLLVSGTII
APSDPDAWNGLDPHKWLYFHGVKDFVVTGGGIINGRGQEWWASSCKKKTSNPCRHAPTAV
TFHRIKRLRVHDLTLINSQQMHMAFTACSLVKASHLQVIAPGTSPNTDGIHISSCTSITI
EESMIKTGDDCISIVGNSSDILVRNIICGPGHGISTIDISIGSLGKSNSTAKVQKVQVDG
AFISNTENGVRIKTWQGGQGYARNIMFKNILMSNVSNPIIIDQYYCDSKHPCENQTSAVR
VYDIAFIGIKGTSATEDAIKFACSDIFPCENINLEDIQLSLGSGGVPTAYCWQASGSSSG
DVVPPSCLSSVDSLIEQNVVVETKLHSMFR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcttctgcttcccaaatttccctcctttttgttgtttttgtcggagtcttg
ctgttgagttcgaccgtggttgatgggtttgcgagcgggctgaagctcccttcgtcgagg
gctagatcgaggggaaggcagtggactaacctcactctctcggtttcgcattttggagct
aggggagatggatgcggcgacgacacccaggcatttgtagaagcttggaagcgtgcttgt
tcttcaagagcactagctgtcattgaaatccctgcagactatgtatgtttgatcaggcca
attcaattaggtgggccgtgtaaaggaaagataacattgctggtctctggaacgattatt
gcaccatctgatcctgatgcctggaatgggctagatcctcataaatggctgtatttccat
ggtgtaaaagactttgtggtaactggcggtggaattattaatggcaggggacaagaatgg
tgggcaagctcttgcaagaaaaaaacatccaatccatgccgacatgcccctacggcagtt
acttttcacagaatcaagcgtcttagggtccacgatctaacactgatcaatagtcaacag
atgcatatggctttcaccgcttgttctttagttaaagcatctcatctgcaagtgattgca
ccaggcacaagcccaaacactgatgggatccacataagttcatgtacttctattacgatc
gaggagagtatgatcaagacaggagatgattgcatatctatagtcggcaattcttctgac
attctagtgaggaacattatctgtggaccaggtcatggcataagtactattgatattagt
attggaagcctgggcaaatcaaactccacggcgaaagtgcaaaaggtgcaagttgatgga
gcctttatttccaacactgagaatggtgtaaggatcaaaacatggcagggtggtcagggt
tatgcccgcaacattatgttcaagaatattttgatgagtaacgtctcgaatccaataata
attgatcagtactactgtgattcgaaacatccatgtgaaaaccagacatcagctgtacgg
gtttacgatatcgcattcattggcatcaaaggaacgtcagcaacagaggacgctataaaa
tttgcttgcagtgacatttttccatgtgaaaatataaaccttgaagatatccagttatct
ttgggctctggaggggttccgactgcttattgctggcaggcatcagggtccagttctggt
gacgttgttcccccttcttgtctttcgagtgttgatagcctcatcgaacaaaatgttgtc
gtcgaaacgaagcttcattccatgttcagatga
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