Asparagus officinalis (garden asparagus): 109842462
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Entry
109842462 CDS
T05243
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00450
Selenocompound metabolism
aof00970
Aminoacyl-tRNA biosynthesis
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
109842462
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109842462
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aof01007
]
109842462
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109842462
Enzymes [BR:
aof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
109842462
Amino acid related enzymes [BR:
aof01007
]
Aminoacyl-tRNA synthetase
Class I (U)
109842462
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
109842462
Prokaryotic type
Other AARSs
109842462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
Hormone_recep
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
109842462
NCBI-ProteinID:
XP_020266926
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All DBs
Position
5:117663850..117674563
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AA seq
831 aa
AA seq
DB search
MNPSRIRPANTLALSPTCLSNPPPNSSRTVASLFLPPLQIRSQIFIKPLALHFHLRSSPK
WEKPIPRSSPSGVLSADVFARYCRLRGYNAIYICGTDEYGTATETKAMEEKCSPKEICDK
YHAIHKEVYNWFGISFDEFGRTSTPQQTEVCQAIFHKLWENKWLTEKTMEQLYCDTCKRF
LADRLVEGTCPTLGCDYDSARGDQCEKCGKLLNPTELKDPKCKVCRNTPRLQETNHLFLE
LPALSGKLEEYINTMSVAGGWSQNAIQTTHAWLKEGLKSRCITRDLKWGVPVPHDKYKDK
VFYVWFDAPIGYVSITACYTPEWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTLLGTDE
SWTLMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTKIPAEVWRYYLLSNRPEVSDTLF
TWTDLQAKLNSELLNNLGNFINRVLSFIAKPAGSGYGSIIPDVQNAESHQLTKNLGETVG
KLVDQYLDAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDPSSCSIVIKTSAGLV
FLLANLLEPFMPSFAVEVLRQLSLSADAHISLCDEKGDTEKAKRPWDFLPSGHKIGKPEP
VFKEMKDEDVEFFRQKFAGSQSDRIEKAEAEAKIAEKLKSTKISEGNAKKQKVKSIGAAK
PKPSEAEISVSRLDIRVGLIKKVQKHPDADSLYVEEIDIGEELPRTVVSGLVKFIPLEEM
QDRKVCVLCNLKPATMRGIKSQAMVLAASNDDHTKVELVDPPASAKIGESVTFPGYSGEP
DNMLNAKSKVWEKLQIDLHTDAELTACYKDVPFTTSAGICKVTSIVNGAIR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatccaggatccgacccgcaaacaccctcgccctttctcccacttgcctctcg
aatccgcctccaaattcctctcgcactgtcgcctctctcttcctccccccactccaaatt
cgctctcaaattttcataaaacccctcgcgcttcacttccatctacgatcgagcccaaaa
tgggagaaaccaatcccccgaagctccccatcaggtgttttgagcgccgatgtgttcgcg
aggtactgccggctgaggggatacaacgcgatctatatttgcggaactgatgagtacggg
acggcgacggagactaaggccatggaggagaaatgctctcccaaggagatttgcgataaa
taccatgcaattcataaggaagtctataactggtttggaataagttttgatgagtttggt
cgcacatcaactccacaacagaccgaagtttgccaagcgatatttcacaaattgtgggag
aataaatggcttactgaaaaaactatggagcagctttattgtgatacatgcaaacgcttt
ttggctgatcgattagtggagggaacatgcccaactttgggctgcgattatgattctgca
cgtggtgaccagtgtgaaaaatgtgggaaattgttaaatcctactgaacttaaggatcct
aagtgcaaggtttgccggaacactccacgcctgcaagaaacaaaccacttgtttttggaa
ctccctgccctcagtggtaaacttgaagagtacatcaatactatgtcagtggctggagga
tggagccaaaatgctattcagacgacacatgcatggttgaaggaaggattaaagtctcgt
tgtattacaagggatcttaaatggggtgttcctgttccccatgacaagtacaaagataag
gtgttttatgtttggtttgatgctccaattggatatgtttcgatcacagcttgttacaca
cctgaatgggaaaaatggtggaaaaatcctgaaaatgtggagctatatcagttcatgggc
aaagataatgtgccatttcacacggttatgtttccttcaacgcttcttggaactgatgaa
agctggacgttaatgaagacgataagtgtcacagagtatttaaactatgaagcagggaag
ttttccaaaagtaagggtattggagtttttggtaacgatgcaaaggatacaaagattcct
gcagaagtttggcgatactacttactaagtaacaggcctgaagtatcagacacattgttt
acgtggacagatttgcaggctaaactgaacagcgagttgctgaataatttggggaatttt
attaatcgtgttctgagcttcattgctaaacctgctggatcaggctatggttccatcatt
cctgacgttcagaatgcagaatcgcatcagttaaccaaaaatttaggtgagacagttggg
aaattggtagatcaatatcttgatgccatggagaaggttaagctaaaacagggtttaaag
actgctatgagcatatcaagcgaagggaatgcatatttgcaagagagccaattctggaag
ctttacaaggaagatccttcttcatgctccatcgttataaagacttcagctggacttgtt
ttccttcttgcaaatttattagaacctttcatgccctcctttgctgtagaagttctaagg
cagcttagtttgtctgctgatgcacatatctcattatgtgatgagaaaggagacacggag
aaggcaaaaagaccttgggactttcttccatctggtcataaaatagggaaacctgaaccg
gtgttcaaagaaatgaaagatgaagatgtagaattttttaggcagaaatttgctggtagt
cagtctgatagaatcgagaaagcagaagctgaggcgaagattgctgagaaactgaagtcc
acaaagatttcagaagggaatgcaaagaaacaaaaggtgaagtccataggtgctgcaaaa
ccaaagccctcagaagcagaaatttctgtttctaggcttgacattcgtgtaggtctcatc
aagaaagttcagaagcatccagatgctgactccctatacgtggaagagattgatataggt
gaggagttgcctaggaccgttgtgagtggtctcgtcaaattcattcctcttgaagaaatg
caggatcgaaaggtatgtgttctttgtaatcttaagccagccaccatgaggggtattaaa
tcgcaggcaatggtattagctgcctccaatgatgatcacaccaaagttgagttggttgac
ccgccagcttcagccaagatcggggaatctgtaacttttcctgggtattctggagaacca
gacaacatgttgaatgccaagagcaaagtctgggaaaagttgcagatagatttacacaca
gatgcagagttgacagcttgctataaagacgttccattcacaacatctgctggtatttgc
aaggtcacatccattgttaacggggcaattaggtaa
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