KEGG   Asparagus officinalis (garden asparagus): 109845462
Entry
109845462         CDS       T05243                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109845462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109845462
   04121 Ubiquitin system [BR:aof04121]
    109845462
Spliceosome [BR:aof03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    109845462
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    109845462
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109845462
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 109845462
NCBI-ProteinID: XP_020270299
LinkDB
Position
6:complement(545256..554342)
AA seq 767 aa
MANEHARDRDKDHDRYDRSRGREKDYEKQGEREKVKDKDRERGKDRGREKDRDKVKDRER
EKDKLKDREREEREKVREDSSRNRKTDYDKPRTRNKDQDAGGSKGVELDERREVGNGDTN
VDGKAEEAESAMDDHDKKPVGSQSNAELEERLKKMKQERLKRKAEDTSEISSWLSKSRRL
EEKRNEVREKAARVSKILDEQDNFGEESDDEAAIGHSKKDLAGVKILHGLDKVLEGGAVV
LTLKDQSILADGDINEEIDMLENVEIGEQRRRDDAYKAAKKRNLYEEAFNDDMGSRKTIL
PQYDDPVEDEGVTLDEGGRFTGEAEKKLEELRKRIEGGSISRAFEDLNSAAKSTSDYYTP
DEILQFKKPKKKKSLRKKDKLDLDALEAEAKSAGLGVGDLGSRKDSKRLSTKEEAARIES
EMRSNAYQSALAKAEEASKVLRQEQTLTGKDVDDDDMVFGEDYDDLEKSLAQARKLTLKR
KEEDAPSGPQAVALLASAKGQEDTQSFTVGEPQENKVVITEMEEFVLGLQLNEDTQKPEL
EDVFNDGDDIAKPVEHKMEIDVGGWTEIQETNDNEQPATEDKEDVAPDEIIHEVAVGKGL
SGALKLLKDRGTLKESIDWGGRNMDKKKSKLVGINDNDGPKEIRIERTDEFGRIMTPKEA
FRMISHKFHGKGPGKMKQEKRMKQYQEDLKTKQMKASDTPLLAMERMREAQAQLKSPYIV
LSGHVKPGQTSDPRSGYATLEKDHPGSLTPMLGEKKVEHFLGINRKS
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggccaatgaacatgcaagggacagagataaggatcacgacaggtacgatagaagtaga
ggacgggagaaggattatgagaagcagggggagagagaaaaggtgaaagataaagatcgt
gagagggggaaggacagagggagggaaaaggatcgagacaaggtgaaggatagggaaagg
gaaaaggacaaattaaaagatcgcgaaagggaagagagagagaaagtcagggaggattca
tcgagaaaccggaaaaccgattatgataaacccagaacaaggaataaagatcaggacgca
ggtggaagcaaaggagttgaattggatgaaagaagagaagttggtaatggggacactaac
gttgatgggaaggcagaagaagctgaatctgcaatggatgatcatgacaagaagcctgtg
gggtcacaatcaaatgcggagcttgaagaacgcttgaaaaaaatgaaacaagaacgactg
aagagaaaagctgaggatacttcagagatttcatcatggcttagtaaaagccggaggctc
gaggaaaagaggaatgaggtcagggagaaagctgcacgtgtttcaaaaattttggatgag
caggataattttggagaagaaagtgatgatgaggcagcaattgggcacagcaaaaaggat
ttagcaggggttaaaattcttcatggtctcgataaggtacttgagggtggagcggttgtc
ctcactctaaaagatcagagcatccttgctgatggtgatattaatgaagagattgatatg
cttgaaaatgtggaaattggagagcaaaggcgaagagatgatgcctacaaggctgctaag
aaaaggaatttatatgaggaagcgttcaatgatgacatgggttctaggaagacaatactt
ccacaatacgacgatccggttgaggatgagggagtaactttggatgaaggtgggcgcttt
actggcgaagcagagaaaaaactcgaagaactacgcaaaaggatagaaggtggctctata
agcagagcatttgaagatcttaattcagcagcaaagagtacatccgattattatactcca
gacgaaatacttcaatttaagaagcctaagaaaaagaaatctttgaggaagaaggacaaa
cttgatttggatgcacttgaagcagaagctaaatccgctggacttggtgttggcgatctt
ggttccaggaaggattctaagagactatccaccaaggaagaagcggccagaattgagtct
gaaatgagaagtaatgcttaccagtcagccttagctaaagcagaggaggcatccaaagtt
ttgcgtcaggagcaaactctaactggtaaggatgtggatgatgatgatatggtttttggg
gaagactatgacgatcttgagaagtcccttgcgcaagctagaaaactcacactaaagagg
aaagaggaagatgcaccttctggtcctcaggcagttgcacttttagcttcagcaaagggg
caagaagacactcaaagctttacagtaggagagccacaagaaaataaagttgttatcact
gaaatggaggagtttgttctgggtttacagctaaatgaagatactcaaaagcctgaattg
gaagatgtttttaatgatggcgatgacattgcaaaacctgttgaacataaaatggaaatt
gatgttggaggttggacggagatccaagaaacaaatgacaatgaacagcctgctactgag
gacaaagaggatgttgctccagatgaaatcatccatgaggttgctgttgggaaaggttta
tcaggtgcgcttaagttgctcaaagatcgcgggacgctcaaggagagtatagattgggga
ggtagaaacatggacaagaagaaaagcaaacttgtcggcattaatgataacgatggtcca
aaagaaattcgtatcgagaggactgatgaatttggtcgaattatgaccccaaaggaagca
ttccggatgatctcccataaatttcatggtaagggtccaggcaaaatgaaacaagaaaag
cgtatgaagcaatatcaagaagatttgaagacgaagcagatgaaagcttctgacactcca
ttgctggcgatggaacgaatgagggaagctcaagcgcagctgaagtctccctatatcgta
ctcagtgggcatgttaagccagggcaaactagcgatccgagaagtggttatgctacattg
gagaaagatcatcccgggagtttgacacctatgcttggtgagaagaaggttgagcatttc
ttgggcatcaatcgcaagtcttaa

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