Bradyrhizobium oligotrophicum: S58_55900
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Entry
S58_55900 CDS
T02484
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S58_55900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aol03019
]
S58_55900
Enzymes [BR:
aol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
S58_55900
Messenger RNA biogenesis [BR:
aol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
S58_55900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BAM91567
UniProt:
M4ZCN6
LinkDB
All DBs
Position
complement(6349023..6350273)
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AA seq
416 aa
AA seq
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MDPRVQSAPWLSSGPAARVLALLNCDGEEARVVGGAVRNALLGIAIGDIDIATTALPAEV
IRRAKAASIKSVPTGIDHGTVTLVLEGHPFEVTTLREDAETFGRKAKVEFGRDWIGDAHR
RDFTINALSVGPDGVVHDHVGGLADIEARRVRFIGDPAQRIAEDYLRILRFFRIHSAFGH
GEPDRDGYLACIAGRAGLATLSAERIRMEMLKLLVTDGAVGAVTAMTDGGLLTAILGGVA
YLGPFAAMIEIEHELALPASAVRRLAALAVAVTEDARRLGVRLKLSNAETKALDGMGHRW
WRFASADEARTRRLLYRLGETVYRDRLLLGWARAGCDRAAPRWREFALLPQRFTPPKLPL
KAADFIARGVAEGPLLGHVLTLAEDAWLAADFPLDEASLNAIADQAAARVNRDGRS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgggtgcagagcgcgccctggctttcatccggtccggccgcgcgggtgctc
gcactgctcaattgcgacggcgaggaagcgcgcgtggtcggcggcgccgtccgcaacgcg
ctgctcggcatcgccatcggcgacatcgacattgcaacgacggcactgccggccgaggtg
atccgtcgcgccaaggccgcctctatcaagagcgtgccgaccggcatcgatcatggcacc
gtcaccctggtgctcgaaggacatccgttcgaggtgacgacgctgcgcgaggacgccgag
accttcggccgcaaggccaaggtcgagttcggccgcgattggatcggcgatgcgcaccgc
cgcgacttcaccatcaatgcgctctccgtggggcccgatggtgtcgtgcacgatcatgtc
ggtggtctcgctgacatcgaagcccgccgcgtgcgcttcatcggcgatcccgcccagcgc
attgccgaggactatctgcgcatcctgcgcttcttccgcatccactcggccttcggccac
ggcgagcccgaccgcgacggctacctcgcctgcatcgccggccgcgccggtctggccacg
ctgtccgccgaacgtatccgcatggagatgctgaagctgctcgtcaccgatggtgcggtc
ggcgcagtcacggcgatgaccgacggcggattgctgaccgcgatcctgggtggcgtcgcc
tatctcggcccgttcgccgcgatgatcgagatcgagcacgagctggcgctgccggcgagc
gcggtccggcgtctcgccgcgctcgcggttgcggtcaccgaggatgcgcgccggctcggc
gtcaggctgaagctctccaatgccgagaccaaggcgctcgacggcatgggccatcgctgg
tggcggttcgcctccgccgacgaggcgcgcacgcggcggctgctctatcgtctcggcgag
accgtctatcgcgaccgcctgctgctcggctgggcgcgcgccggctgcgatcgcgccgcg
ccgcgctggcgcgagttcgcgctgttgccgcagcgcttcacgccgccgaaattgccgctg
aaggccgccgatttcatcgcgcgcggggttgcggaagggccgcttctcggtcatgtgctg
accctcgcagaggatgcctggttggctgcggacttcccgctcgacgaggcatcgctgaac
gcgatcgccgatcaggcggcggcgcgtgtcaaccgcgacggacgttcatga
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