Bradyrhizobium oligotrophicum: S58_68540
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Entry
S58_68540 CDS
T02484
Name
(GenBank) putative DNA polymerase III
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol03030
DNA replication
aol03430
Mismatch repair
aol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
S58_68540
03430 Mismatch repair
S58_68540
03440 Homologous recombination
S58_68540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aol03032
]
S58_68540
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_68540
Enzymes [BR:
aol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
S58_68540
DNA replication proteins [BR:
aol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
S58_68540
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
S58_68540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
AAA
AAA_22
AAA_16
AAA_30
RuvB_N
AAA_5
AAA_18
AAA_14
AAA_19
AAA_24
AAA_assoc_2
TsaE
AAA_2
nSTAND3
Rad17
SKI
SRP54
AAA_28
RNA_helicase
CbiA
AAA_17
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BAM92820
UniProt:
M5A1T3
LinkDB
All DBs
Position
complement(7754540..7756381)
Genome browser
AA seq
613 aa
AA seq
DB search
MTDAGAPPVPPDSAEAPAKPYRVLARKYRPSSFADLIGQEAVVRTVSNAFETGRIPQAWI
LTGVRGVGKTTTARILARALNYELPDGSVKGPTIHMPVLGTHCQAIMESRHMDILEMDAA
SHTGVDDVRQINDSVRYAPASARYKVYIIDEVHMLSTAAFNAFLKTLEEPPEHAKFVFAT
TEIRKVPVTVLSRCQRFDLRRVEADVLMKHLAGIATKEGVTIEPEALGIIARAAEGSVRD
SLSLLDQAIAHSAGEVRADDVRQMLGLADRTRVIDLFHHLASGDIAAAFKEFREQYDVGA
DPVVVLSDLAEFVNFVTRVKVVPATADNVAFSETERLRARDFATKLSMRVLSRMWQMLLK
GIAETQGATRPAAAAEMVLVRIAYAADLPTPDEAIRMIDQNGGGSPVVTNGGGARPASAP
SMSAGAPPVMSSAPMQAPRAQGPTLAAVGGGMRPQAMASQPAPASQDQPVLRIASFQELA
ALAGKNRDLITKSALEMDVRLVRFEEGRLEIALERTAQRSLVSDLGRKLEDWTGRRWTVI
VSNEAGQATLREQNLRAKSEREAAAEADPRVQEILARFPGTKVVEVRRLAPEPPESDASA
VEPPDESDSDDDF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgctggcgccccacccgttccgcccgacagcgccgaggctcccgccaaaccc
taccgggtgctggcgcgcaaataccggccctccagcttcgcagatctgatcggccaggag
gctgtggtgcgcacggtctcgaacgcgttcgagaccggccggattccgcaggcctggatc
ctgaccggcgtccgcggcgtcggcaagacgaccaccgcccgcatcctggcccgcgccctg
aactacgagctgccggacggatcggtgaagggtccgaccatccacatgccggtgctcggg
acccattgccaggcgatcatggaaagccggcacatggacatcctggagatggacgcggcg
tcgcataccggcgtcgacgacgttcgccagatcaatgacagcgtccgctatgcgccggcc
agcgcgcgctacaaggtctacatcatcgacgaagtccacatgctgtcgacggcggcgttc
aacgccttcctgaagacgctggaggagccgccggagcacgccaaattcgtgttcgcgacc
accgagattcgaaaagttccggtgacggtgctgtcgcgctgccagcgcttcgacctgcgc
cgggtcgaggccgacgtgctgatgaagcatctcgccggcattgcgaccaaggaaggcgtc
acgatcgagcccgaggcgcttggcatcattgcgcgcgccgctgaaggctcggttcgcgat
tcgctgtcgctgctcgaccaggcgatcgcccacagcgccggcgaggtgcgggccgacgac
gtccggcagatgctgggccttgccgaccgcacccgggtcatcgacctgtttcaccatctc
gccagcggcgacatcgcggcggcgttcaaggaattccgcgagcagtatgacgtcggtgcc
gatcctgtggtcgtgctgtccgatctcgccgagttcgtcaacttcgtcacccgcgtgaag
gtggtgccggcgacggccgacaacgtcgccttcagcgagaccgagcggcttcgcgcgcgc
gatttcgcgaccaagctgtcgatgcgcgtgctgtcgcggatgtggcagatgctgctcaag
ggcatcgccgagacgcagggcgcgacgcgcccggccgccgcggcggagatggtgctggta
aggattgcctacgcggccgatctgccgacgcccgacgaagccattcggatgatcgaccag
aatggcggcggatcgcctgttgtcacgaacggcggcggcgcgcgtcctgcatctgcaccc
agcatgagtgcgggtgcacctccggtgatgagctcagcgccgatgcaggcgccgcgtgcg
caaggcccgacgctcgccgcggtcggtggtggaatgcgtccgcaggcgatggcatcgcag
ccggcgccggcatcgcaggaccagcctgtgctgcgcatcgcgagcttccaggagctcgcc
gcactcgccggcaagaatcgcgacctgatcaccaagagcgcgctcgagatggacgtcagg
ctcgtccgcttcgaagagggacggctggagatcgcgctggaacggacggcgcagcgctcg
cttgtctccgacctcggccgcaagctcgaggattggaccggccggcgctggaccgtgatc
gtttccaacgaggcgggccaggcgaccttgcgcgagcagaatctgcgcgccaagagtgaa
cgcgaggcggccgcggaagccgatccgcgggtgcaggagatcctggcgcggttcccgggc
accaaggtggtcgaagtgcgcaggctcgcccccgagccgcccgaatcggacgccagtgct
gtcgagccgcctgacgagtccgatagtgatgatgacttctag
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