Aquabacterium olei: DEH84_00020
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Entry
DEH84_00020 CDS
T05429
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aon
Aquabacterium olei
Brite
KEGG Orthology (KO) [BR:
aon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aon03032
]
DEH84_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
aon03400
]
DEH84_00020 (gyrB)
Enzymes [BR:
aon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DEH84_00020 (gyrB)
DNA replication proteins [BR:
aon03032
]
Prokaryotic type
DNA Topoisomerases
DEH84_00020 (gyrB)
DNA repair and recombination proteins [BR:
aon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DEH84_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Baculo_FP
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AWI52013
UniProt:
A0A2U8FM40
LinkDB
All DBs
Position
4375..6900
Genome browser
AA seq
841 aa
AA seq
DB search
MSDVTPSPDQQPAVTAAQADTGYGEGSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFE
VVDNSIDEALAGHCDDIVVTIHTDNSISVVDNGRGIPTGVKMDDKHEPKRSAAEIALTEL
HAGGKFNQNSYKVSGGLHGVGVSCVNGLSKWLRLTVRRDGHVHQIDFKQGIPQDRLLEER
DGVMTSPMRITGETEKRGTEVHFLPDTEIFQQNNEFHYDILAKRLRELSFLNNGVKIRLI
DERNGKEDNFAYAGGVKGFVEFINKGKSTLHPNIFHAIGDKVSEQGTNVGVEVAMQWNDS
FNESVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDDNELAKKAKVEIAGDDMREGLAC
VVSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVSRLLTDWLLENPTDAKIICGKIVEAARA
REAARKAREMTRRKGVLDGLGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQ
AILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGRGAGGDDFNPDKLRYHRIIIMT
DADVDGAHIRTLLLTFFFRQMPELVERGHIYIAQPPLYKVKHGKQEQYLKDAHALDEYLT
KVALDGAVVEPGQGKPAIAGEQLKELADAYVTANSVVERLGNWMDIEALRAIANGLTLSL
DTLEEAERSAAALKAALHNAEVTAEFDARSDKHILRISRIFHGNTKYSILTPDFVHGADY
EALAKAGTTFKGLLTDEALVRRGEGEKAKEAKVADFRAAMAWLMQQAENSVGRQRYKGLG
EMNPAQLWETTMDPNVRRLLRVQIEDALEADRVFTMLMGDEVEPRRDFIETNALRATNID
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtgacgccttctcccgaccaacaaccagccgtgaccgccgcgcaggccgac
accggctatggcgagggcagcatccagatcctcgagggcctggaggccgtgcgcaaacgc
cctggcatgtacatcggcgacacgtcggacggcaccggcctgcaccacctggtcttcgag
gtggtcgacaactccatcgacgaagccctggccggccactgcgatgacatcgtcgtcacc
atccacaccgacaactcgatctcggtggtggacaacggccgcggcatcccgaccggcgtg
aagatggacgacaagcacgagcccaagcgctcggcggccgaaatcgcgctgacggagctg
cacgccggcggcaagttcaaccagaacagctacaaggtctccggtggcctgcacggcgtg
ggcgtgtcgtgcgtgaacggcctgtcgaagtggctgcgcctgacggtgcgccgcgatggt
catgtgcaccagatcgacttcaagcagggcattccgcaggaccgtttgctcgaagagcgc
gatggcgtgatgacgagcccgatgcgcatcaccggcgagaccgagaagcgcggcaccgag
gtgcacttcctgcccgacaccgaaatcttccagcagaacaacgagttccactacgacatc
ctggccaagcgcctgcgcgagctctcgttcctgaacaacggcgtcaagatccgcctgatc
gacgagcgcaacggcaaggaagacaacttcgcctacgccggcggcgtcaagggctttgtc
gagttcatcaacaagggcaagagcacgctgcaccccaacatcttccacgccatcggcgac
aaggtgtcggaacagggcacgaacgtcggcgtggaagtggcgatgcagtggaacgattcg
ttcaacgagtcggtgctctgcttcaccaacaacattccgcagcgtgatggcggcacccac
ctgacgggcctgcgcgccgcgatgacccgcgtcatcaacaagtacatcgacgacaacgag
ttggccaagaaggccaaggtcgagatcgccggtgacgacatgcgcgaaggcctggcctgc
gtggtgtccgtgaaggtccccgagcccaagttcagcagccagaccaaggacaagctggtg
tcgagcgaggtgcgggcgccggtggaagacatcgtcagccgcctgctgaccgactggctg
ctggagaacccgaccgacgccaagatcatctgcggcaagattgtggaagcggcccgagcc
cgtgaagccgcccgcaaggcccgtgagatgacgcgccgcaagggcgtgctcgacggcctg
ggcctgcccggcaagctggccgactgccaggaaaaggatcccgcgctgtgcgagatctac
atcgtggagggtgactccgccggcggctccgccaagcaggggcgtgatcggaagttccag
gccatcctgccgctgcgcggcaagatcctgaacgtcgagaaggcccgctatgaaaagctg
ctgaccagcaacgaaatcctcacgctgatcacggcgctgggcacgggcatcggccgcggt
gcggggggcgatgacttcaaccccgacaagctgcgctaccaccgcatcatcatcatgacc
gacgcggacgtggacggcgcccacatccgcaccctgctgctgaccttcttcttccgccag
atgccggagctggtcgagcgcggccacatctacatcgcgcagccgccgctctacaaggtc
aagcatggcaagcaggagcagtacctgaaggatgcgcacgcgctggacgagtacctgacc
aaggtggcgctggatggcgcggtggtggagcccgggcagggcaagccggcgatcgctggt
gagcagctcaaggagctggccgatgcctacgtgacggccaacagcgtggtcgagcgcctg
ggcaactggatggacatcgaggccctgcgcgccattgcgaatggcctgacgctgagcctg
gacacgctggaagaagcggagcggagcgccgccgcgctgaaggccgcactgcacaacgcc
gaggtgacggccgagttcgacgcccgcagcgacaagcacatcctgcgcatcagccgcatc
ttccacggcaacaccaagtacagcatcctcacgcccgacttcgtgcacggtgccgactac
gaggccctggccaaggccggcaccacgttcaagggcctgctgacggacgaagcgctggtg
cgccgcggtgaaggcgagaaggccaaggaagccaaggtggcggacttccgtgcggccatg
gcgtggctgatgcagcaggccgagaactcggtgggccgccagcgctacaagggcctgggc
gaaatgaaccccgcgcagctgtgggaaacgacgatggacccgaacgtgcgccgtttgctg
cgcgtgcagatcgaggatgctcttgaggcggatcgcgtgttcacgatgctgatgggcgat
gaagtggagccgcggcgcgatttcatcgagacgaatgcgttgagggcgacgaacattgac
gcgtga
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