Amycolatopsis orientalis: SD37_27155
Help
Entry
SD37_27155 CDS
T06703
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aori
Amycolatopsis orientalis
Pathway
aori03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aori00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD37_27155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aori03019
]
SD37_27155
03400 DNA repair and recombination proteins [BR:
aori03400
]
SD37_27155
Enzymes [BR:
aori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD37_27155
Messenger RNA biogenesis [BR:
aori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SD37_27155
DNA repair and recombination proteins [BR:
aori03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SD37_27155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANN18937
UniProt:
A0A193C382
LinkDB
All DBs
Position
6297920..6299755
Genome browser
AA seq
611 aa
AA seq
DB search
MAAPDIGTSEAVETLNRVFGYDSFRGDQQAIVEHVIAGGDALVLMPTGGGKSLCYQIPAL
VRPGVGVVISPLIALMQDQVDALRNLGVRAGFLNSTQDYTERNRVEAAFLSGDLDLLYLA
PERLSVESTVRLLDRGKISLFAIDEAHCVSQWGHDFRPDYLMLSAVHERWPDVPRIALTA
TATKTTHAEIASRLNLEDARHFVASFDRPNIQYRIVGKNSPQRQLLELLRTEHKGDAGIV
YCLSRNSVEKTADFLVENGIPAVPYHAGLDARTRAKHQSRFLREDGLIVVATIAFGMGID
KPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDMSEGSEAH
KRQQSAHLNAMLALCETVECRRVQVLSYFGQRSEPCGNCDTCLAPPETWDGTIPAQKLLS
TIVRLQNERRQKFGAGQIIDILLGKSTPKVTQHRHDSLKVFGIGTELKEQEWRAVVRQLL
AQGLAAVEGDYGSLVLTEGSAEVLNGQRKVQLRREPERAAKAAARSSAKKAAAADMPAEA
APVFELLRSWRAAAAKEQGVPAYVIFHDATLRQIATKRPATLQELGTVSGVGENKLAKYG
EQILETLSAQS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcccccgacatcggtacctcggaagccgtcgaaacgctgaaccgcgtcttcggc
tacgacagcttccgcggtgaccagcaggccatcgtcgaacacgtcatcgcaggcggtgac
gcgctcgtcctcatgcccaccggcggcgggaaatcgctgtgctaccagatcccggcgctg
gtccggccgggtgtcggggtggtgatctcgccgctgatcgcgttgatgcaggaccaggtc
gacgcgctgcgcaacctcggcgtgcgcgcgggtttcctcaactcgacgcaggactacacc
gagcgcaaccgggtcgaagccgcgttcctctccggtgatctcgatctgctgtacctggcg
ccggaacggctgtcggtcgaatcgacggtgcggctgctcgaccgcggcaagatctcgctg
ttcgcgatcgacgaggcgcactgcgtctcccagtggggccacgacttccggcccgactac
ctgatgctgtccgcggtgcacgaacgctggccggacgtgccgaggatcgcgctcaccgcc
accgccacgaagacgacgcacgccgagatcgcgtcccggctcaacctcgaggacgcgcgg
cacttcgtcgcgagcttcgaccggccgaacatccagtaccggatcgtcggcaagaactcg
ccgcagcgccagctgctggaactgctgcgcaccgagcacaagggggacgcggggatcgtc
tactgcctgtcgcggaactcggtggagaagaccgcggacttcctggtggagaacgggatc
ccggcggtgccctatcacgcgggcctggacgcgcggacgagggcgaagcatcagtcgcgg
ttcctgcgcgaggacgggttgatcgtcgtcgcgacgatcgccttcggtatgggcatcgac
aagccggacgtgcgtttcgtcgcgcatctggacctgccgaagtcagtcgagggctactac
caggagacaggccgcgcgggccgggacgggctgccgtcgacggcgtggctggcgtacggc
ctccaggacgtcgtgcagcagcgcaagatgatcgacatgtcggagggctccgaggcgcac
aagcggcagcagagtgcccacctcaacgcgatgctcgcgctgtgcgagacggtcgaatgc
cgccgggtgcaggtgctgagctacttcgggcagcgaagcgagccgtgcgggaactgcgac
acctgcctggcaccgccggagacctgggacggcacgatcccggcgcagaagctgctctcc
accatcgtccggctgcagaacgagcggcggcagaagttcggcgcggggcagatcatcgac
atcctgctcggcaagtcgacgccgaaggtgacccagcaccgccacgattccctgaaggtc
ttcgggatcggcacggaactgaaggagcaggagtggcgggccgtggtccggcagctgctc
gcgcagggcctcgccgccgtcgagggcgattacggctcgctcgtgctcacggagggcagc
gccgaggtcctgaacggacagcggaaggtccagctgcggcgtgagccggagcgggcggcc
aaggcggcggcacgctccagcgcgaagaaggccgcggccgccgacatgccggccgaagcg
gcgccggtgttcgaactgctgcgttcgtggcgggccgcggcggcgaaggagcagggagtg
cccgcgtacgtgatcttccacgacgcgaccctgcgccagatcgccaccaaacggcccgcc
acgctgcaggagctgggtacggtcagcggcgtcggtgagaacaagctcgccaagtacggc
gagcagatcctcgagacgctttcagctcagagctag
DBGET
integrated database retrieval system
