Aeribacillus pallidus: AP3564_09815
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Entry
AP3564_09815 CDS
T04993
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
apak
Aeribacillus pallidus
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apak03400
]
AP3564_09815
Enzymes [BR:
apak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AP3564_09815
DNA repair and recombination proteins [BR:
apak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AP3564_09815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DEAD
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ASS90472
UniProt:
A0A223E5C5
LinkDB
All DBs
Position
2005771..2009274
Genome browser
AA seq
1167 aa
AA seq
DB search
MGIKFLVGSSGTGKTTAILNEIREKLKEDPYNGKPILFLVPDQMTFQMEYELMKTPELGG
IIRAQVLSFNRLAWRVLQEEGGISRTFISQTGMNMFLRKIIEEKKHEFKVFSKASEKKGF
IEHIEQMITEMKRYIISPDMLDDQVKKLAESHDHRERILSDKLKDLAGIYRSVEKLFADK
YIDSEDYLQLLSEKIYESSYMDGAEIYIDGFHNFTPQELQVIESMMKTASSITIALTLDK
PPEEAVADELHLFYMTAETFSLLKKMAERNNISIDEVAYMTDRKRFIEEPSLVHLEKMYS
SHTPEPFHGDSAIVFMQAVNRRAEIEGIAREIIRLVRDEGVRFREIALLIRNMSDYRDLL
EQLFQDYEIPFFIDEKSSMTYHPLIEFIRSSLEVITGNWRYEAVFRTIKTEFLYPLDADK
AEMRKEMDQLENYVLAYGIQGKKWTDQAGWTYRKYHSFYGNDKKTDEEEEIEKRINQLRK
LIVEPLQALENKMKRAKTGRDMAEALYMYLEQTKVPDKLELLRLDAENGGNLIEAREHDQ
VWNAVIELLDEFVEIMGDQEISIHLFREMVETGMESMKFSLVPPAIDQVIVATLDRSRLY
GIKMAFIAGANDGVLPAKPVEDGVLTDDERELLYHNGVKLAPTARRKLLDENFLIYLALA
SAKQKLYLSYSLADEEGKALMPSIIVKRLKEMFPDAKEMISLNEPESEEAEEQLSFIVSP
NVSLSVLTSKLQNWKKQYPLHELWWDVYNYFVYDQEWSSKAKKAIASLFYSNTERPLSEE
VSRKLYGRKIQGSVSRMERFRACPFAHFASHGLKLKEREYYRLEAPDIGQLFHAALKLMA
DRLQSMKVEWRELTKENCERLAHDAVEQLAPKLQKEILMSTNRHYYIKRKLQNIVARASK
VLSEHAKASGFVPIGLEISFDEKSKLPPFRFKLENGCTLEVVGRIDRVDKAESSKGLLLR
IVDFKSSDKTLNLAEVYYGIALQMLTYLDVVISNSQSWLGVEATPAGVLYFHIHDPFIQS
PDLLTDDEIEEEILKKFKMKGLLLGDEETVRLMDQKLESGYSKIVQAGIKKTGEFYANSQ
IASEDEFHALRSYIRREFKRIGTEITDGNISIAPYKMKEKTPCTFCSFKLVCQFDESIET
NRFRILKSLKGEEVLQKVREKVDSDEE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaagtttttggtcggttcatccggcacaggaaaaacgacggcaatcttaaac
gaaattagggaaaaattaaaagaagatccgtataatggaaaacctattttgtttcttgtt
ccagatcaaatgacttttcaaatggaatatgaactgatgaaaactccggaattaggagga
atcattagagcgcaagtattgagcttcaaccgtttggcgtggagggtgctgcaggaggaa
ggaggcatcagccgtacctttatttcccaaacaggcatgaacatgtttcttcgaaaaatc
atcgaagaaaaaaagcacgaatttaaagtgttttccaaagccagtgaaaaaaaaggcttt
attgagcatatcgaacagatgattacagaaatgaaaagatatatcatcagtccagatatg
ctggatgatcaagtaaaaaaattagcggaaagccatgatcatagagagcggattctttcc
gataaattgaaagatttggcgggcatctatcgttccgtggaaaaattatttgctgataaa
tacatagattcagaggattatttgcagcttctttcagagaagatttatgaatcaagctat
atggacggagcggaaatttatatcgacggctttcacaattttacgcctcaagaattgcaa
gtaatcgaatcgatgatgaaaacagcttcttctataacaatcgctctcacattggataaa
ccgcctgaagaggccgttgccgacgagcttcatttattttacatgacggctgaaaccttt
tctttgctgaaaaaaatggctgaacgaaataatatttccattgatgaagtagcatatatg
actgaccggaaacgttttattgaagagccgtcacttgttcatctagaaaaaatgtactct
tcccatactcccgaaccttttcacggagacagcgcgattgtatttatgcaagcggtgaat
agacgcgccgaaattgaagggattgctagagaaattatccgcctcgttcgggatgaggga
gtgcgatttcgggagattgcactgcttattagaaacatgtccgattacagagatttgctg
gagcaattgtttcaagattacgagattcctttttttatagatgaaaaaagctcaatgaca
tatcatccgctgatcgaattcatccgctcgagcttggaagtcataaccggaaactggcgg
tatgaagctgttttcagaacgattaaaacagaatttctttacccgctagatgccgataaa
gccgaaatgagaaaagaaatggatcaattggaaaattatgtgcttgcctacggtattcaa
gggaaaaaatggacggatcaagccggctggacgtacaggaagtaccattcattctatggc
aacgacaaaaagacagatgaagaagaggaaatagaaaaacggatcaatcaattacggaag
ctgattgtggagcctctgcaggcattggaaaataagatgaaacgcgccaaaaccggcagg
gatatggccgaagcgctatatatgtatttagaacaaacaaaagtgcctgataagctggag
cttcttcgtctagatgcggaaaatggagggaacttgattgaagcaagggagcatgatcaa
gtttggaatgctgtgatagagctattggatgaatttgtagaaattatgggcgatcaggaa
atttccattcatttgtttagggaaatggtcgaaaccggaatggaatcgatgaaattttct
ctcgttccgccggccattgaccaagtgattgtcgcaacacttgaccggtcacgtttatat
ggcattaagatggcatttattgcaggagcaaatgacggagtgcttccggcaaaaccggtg
gaagacggagttttaacagatgatgaaagagagcttctatatcataatggagtgaagctt
gcgccgacagctcgaagaaaattgctggatgaaaattttttgatttatttagcgctcgcg
tctgctaagcaaaagctgtatttatcgtattctttggcggatgaagaaggaaaagcgctc
atgccgtctattattgtcaaacggttaaaagaaatgtttccagatgctaaggaaatgatc
tctcttaatgaaccggaaagtgaggaggcggaagaacagctttcttttattgtcagtccg
aatgtttctttgtctgttttaacttcaaaattacaaaattggaaaaaacagtatcctctc
catgagctgtggtgggatgtttacaattactttgtatatgatcaagaatggagcagcaaa
gcgaaaaaggcgattgccagcctgttttattcaaatacagaaagacctttatccgaagag
gtaagcagaaaattatatggacggaaaatacaaggaagcgtttcaaggatggagcggttt
cgggcatgtccttttgcccactttgcttctcacggcttaaagttaaaagaacgggagtat
tacagattggaagcgccggatatcggacaattgttccatgcggcattaaagctgatggca
gaccggcttcaaagcatgaaagtagaatggcgcgaattaacaaaggagaattgcgaaaga
cttgctcatgatgcagtcgaacagctggcgccgaagctgcaaaaagaaattttaatgagc
acaaaccgccactattatattaaacgcaagcttcaaaatattgttgcccgcgcatcaaag
gttttaagcgaacatgcaaaagcaagcggttttgtcccaattggtttagaaatatcattt
gatgaaaaaagcaagctccccccgttccgatttaagcttgaaaacggatgtacgttggag
gtcgtcggaaggatagaccgagtggataaagcggaaagttcgaaaggtcttttgcttcgc
atcgtcgattttaaatcgagcgacaaaacattaaatttggcagaagtgtattacggcatt
gcgctacagatgctcacttacttggatgttgttatttccaattctcaatcttggcttggc
gtagaagcgactccagcaggggtgctgtatttccatattcatgatccgttcatacagtcc
ccagatttattaacggatgatgaaatagaagaagaaattttgaagaaatttaaaatgaaa
ggcttgctgcttggagacgaagaaacggtgcggttaatggatcaaaaattggaaagcggc
tattccaaaatcgttcaagccggcataaagaaaaccggggaattttatgcaaattctcaa
atcgccagcgaggatgaatttcatgcattacgctcgtatatccggcgcgaatttaagcgg
atcggtacggaaataacagacggaaatatttccattgcgccatataaaatgaaagagaaa
acgccttgcaccttttgttcctttaaattggtctgtcaatttgatgaatcgattgaaacg
aaccgttttcgcatattgaaaagcttaaaaggggaagaagtgctgcaaaaggtaagagag
aaggtggattcagatgaagaatga
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