Candidatus Puniceispirillum marinum: SAR116_2292
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Entry
SAR116_2292 CDS
T01207
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAR116_2292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_2292
Enzymes [BR:
apb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SAR116_2292
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAR116_2292
RecFOR pathway proteins
SAR116_2292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ADE40535
UniProt:
D5BPN3
LinkDB
All DBs
Position
2507670..2508272
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AA seq
200 aa
AA seq
DB search
MRVLGIDPGLRATGWGVIDVTAGRLIHVANGVIKPNHKEPDAQRLGRIADDLSAIIAAHQ
PTYAAIEEIFVAKSAKSALKLGMARGVGIMICGQAGLEVHELAARLVKKSITGTGTADKR
QIQDMVSRLLGVTPANADAADALAIAIAASNGAGQIIGDGAGKAASVRVGSTRNAEADSG
LSQAIAAALARDAQDNEGNP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcttggtatcgaccctggattgcgcgccactggatggggcgtcattgatgtc
acagctggacggctgattcacgttgccaatggtgtcatcaagcctaaccacaaagagccc
gacgcccagcgtcttggccggatcgctgatgatctttcggccattattgcggcgcatcaa
ccaacctatgcggcgattgaagaaatctttgttgccaagtcagccaagtcggcgctgaag
ctgggcatggcgcgtggcgtggggatcatgatctgcggtcaggctgggcttgaggtgcac
gagctggcggcccgtttggtgaaaaaatcaatcacgggcactggcactgccgataaacgg
caaatacaggatatggtgtcacgcttgctgggggtgacgcccgccaatgctgatgcagca
gatgcgttggcgatagccattgccgctagcaatggtgccggacagattattggtgatggt
gctggcaaagcggcgtctgtgcgtgtaggttcgacaaggaatgcagaggccgatagtggc
ctgtcccaagctattgcggcggcgttggcgcgcgacgcacaggataatgagggtaatcca
tga
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