Aeropyrum pernix: APE_1792
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Entry
APE_1792 CDS
T00023
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ape
Aeropyrum pernix
Brite
KEGG Orthology (KO) [BR:
ape00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ape03016
]
APE_1792 (ligT)
Enzymes [BR:
ape01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
APE_1792 (ligT)
Transfer RNA biogenesis [BR:
ape03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
APE_1792 (ligT)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
BAA80795
UniProt:
Q9YB03
LinkDB
All DBs
Position
complement(1128277..1128807)
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AA seq
176 aa
AA seq
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MVGRLARLRDSIAHTGVPMKTVEDENFHITLRFIGEVSEPVAAEIGERLASIRFERFRIE
LRGLGAFPRPDRPRVVWVGVGGGAGELRRIRDEVERILTSMGFSPEKQEFHPHVTLARIK
GARNLPALVKLLREMGDVEVGSVEVSSIRLKQSILTRQGPIYKTLYEVKAASSGRV
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtggttggaaggctggctaggctccgggactccatagcccatacaggggttcctatgaag
actgttgaggatgaaaacttccatataaccctgaggtttataggggaagtgagcgagcct
gtggcggcggagatcggggagcggttagcatcgattaggttcgagaggtttaggatagag
cttagggggctgggagctttccccaggcccgatagacccagggtagtgtgggtcggggtt
ggcggtggcgcaggggagctccggaggataagggatgaggttgagaggatcctgaccagc
atgggcttcagccctgagaagcaggagttccacccccacgtgacactggccaggatcaag
ggggcgaggaaccttccagcccttgtgaagctgctgagggaaatgggagacgttgaggta
gggagcgttgaggtttccagtataaggcttaaacagagcatactcacaaggcaggggccg
atatacaagacgctctacgaggtcaaggcagcctcctcgggacgggtctag
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