Acetobacter pasteurianus IFO 3283-03: APA03_00110
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Entry
APA03_00110 CDS
T01812
Symbol
uvrA
Name
(GenBank) excinuclease UvrABC subunit A UvrA
KO
K03701
excinuclease ABC subunit A
Organism
apf
Acetobacter pasteurianus IFO 3283-03
Pathway
apf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APA03_00110 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apf03400
]
APA03_00110 (uvrA)
DNA repair and recombination proteins [BR:
apf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APA03_00110 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
APA03_00110 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
DUF4350
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_21
AAA_25
AAA_23
ATPase
Motif
Other DBs
NCBI-ProteinID:
BAI01220
LinkDB
All DBs
Position
7882..10746
Genome browser
AA seq
954 aa
AA seq
DB search
MKKSDFSGQQSIRVRGARVHNLKNVDIDIPRDKLTVMTGLSGSGKSSLAFDTIYAEGQRR
YVESLSAYARQFLELMGKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLW
ARAGVPYSPATGLPIEAQTVTQMVDRIMALPEGTRLMLLSPVIRDRKGEYRKELAELQRK
GFTRVKVDGTLYEIDDVPSLNRKLRHTVEVVVDRVVVKEGLETRLADSLETALELSDGIV
YAEEVSKDESKENEKLVFSSHFSCPVSGFTLEEIEPRLFSFNAPQGACPACDGIGVETYF
NPHLIVSDESLSLAKGAIAPWKDAKSPLLEQTLESLAQHFSVSMDTPWKDLPENVQNGIL
YGIPENVDFTYKDGRKSYVVSKPFEGVIKSLEKRLRTTESMWVREELSKYQSEKACHVCE
GARLRPEALSVRVAGKNIAQATDLPIGQALDWFDTVLPTLTPQRAEIARRILREILERLK
FLDDVGLEYLTLSRSSATLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLL
GTLQRLKNLGNTLIVVEHDEDAIRSADWLVDMGPGAGVNGGTVVAQGTPAQVAKSPDSLT
GAYLSGRKKIDVPAERRKINKKKILTVEGATGHNLKNVTARFPLGTFTCVTGVSGSGKST
LVIDTLYKALSRQLMGAGTSPEPYKRIKGMELLDKIIDIDQSPIGRTPRSNPATYTDLFT
PIRDWFAELPESKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVFVTCDACKGQ
RYNRETLDIKFRGKSIADVLAMSVDEALPYFSAQSRIRDRLAILQKVGLGYVALGQQATT
LSGGEAQRVKLSKELARRATGRTLYILDEPTTGLHTEDVRKLLEVLHALVDQGNTVVVIE
HNLEVIKTADWIIDVGPEGGDGGGQIVAEGTPEDIAACPESYTGRFLAPLLVKK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcagatttttccggtcagcaaagtatccgggtgcgtggcgcgcgagttcat
aatcttaaaaacgtggatattgatattccgcgggataagctgacagtcatgacagggctt
tccgggtctggcaaatcttctttggcgtttgatacaatctacgctgaagggcaacgccgc
tatgtggaaagcctttccgcctatgcacgccagtttctggagctgatgggcaagccggat
gtagattccatagagggtctttctccagctatttctattgagcaaaaaacaacatccaaa
aacccgcgttctaccgttgggactgttacggaaatttacgattacatgcgtctactatgg
gcgcgcgcgggtgttccatattctcccgctaccgggttgccgattgaagcgcaaacagtc
acccagatggttgatcgtattatggcgttgccggagggcacgcgcctaatgcttctttcc
cctgttattcgtgacagaaagggagaataccggaaggaactggctgagcttcagcgtaaa
ggttttacacgtgtaaaagtggatggaacactttatgaaattgatgatgttccaagccta
aacagaaagttacgccatactgtagaagttgtggtggaccgtgttgtggtgaaggaaggg
cttgaaacacgccttgctgatagccttgaaacagcattggaactttctgatggcattgtg
tatgcagaagaggtttctaaagatgaaagcaaggagaacgaaaaacttgttttctcatca
catttctcctgcccagtaagtgggtttacactggaagaaattgagccccgtctgttttcc
ttcaacgcgccacaaggggcctgtccggcatgtgatggtattggtgtagaaacctacttc
aacccgcatcttattgtttcggatgaaagtcttagtcttgcaaaaggtgctatagcacca
tggaaagatgcaaaatctccactactggaacaaacgcttgaaagtttggcacagcatttt
tctgtaagcatggacacaccatggaaagatcttccagaaaatgtgcaaaacggtattctc
tatggcattccagaaaatgtagattttacctataaagatggcaggaaaagctatgttgtt
tccaaaccatttgaaggcgtgattaaaagcctggaaaaacgcctccgtaccacagaaagc
atgtgggttagagaagagctttccaaatatcagtctgaaaaagcgtgtcatgtttgtgag
ggtgcacggttgaggccagaggctctttctgtgcgcgtggcagggaaaaatattgcgcaa
gccacggatttaccaatagggcaagctttggactggtttgatacagttttgccaactctt
acgccgcaaagagccgaaattgcacgccgtattctgcgtgagattctggaacgcctaaaa
tttcttgatgatgtagggttggaatatctgacactttcaagaagttcagcaacactttct
gggggagaaagccagcgtattcgtcttgccagccagattggttccgggctgacaggtgtt
ttgtatgttctggatgaaccttctattggcctccatcagcgtgataatgaacgtctgctt
ggcacattacagcgtttgaaaaaccttggaaatacgctgattgttgttgaacatgatgaa
gacgctatcagaagtgcagactggctggtagatatggggccgggtgctggtgtaaatggg
ggcactgttgttgcccaaggtacgccagcgcaggttgccaaatctcccgatagtttgaca
ggggcttatctttctggccgcaaaaagattgatgttcctgctgaacgacgaaagataaat
aaaaagaaaattctaacagttgaaggtgctacaggtcacaatctgaaaaatgtaacggct
cgtttcccgcttggtacgttcacttgtgtaaccggcgtatctggtagcggaaagtctact
ctggttattgatacgctttataaggcgctttctcgccagttgatgggggcaggcacatcg
ccagaaccgtataagcgtatcaaggggatggagctgttagacaagattattgatattgac
caatcccctatcgggcgcaccccgcgttctaaccctgcaacctatacagatctctttacg
cccataagagactggtttgcggaactgcctgaaagtaaagcaagaggttacaaacccggt
cgcttttccttcaatgttaaaggtgggcgttgtgaagcatgtcagggtgatggtgttatc
aaaattgaaatgcactttctgccagatgtgtttgtaacgtgtgatgcctgtaaagggcag
cgctataatcgtgaaacacttgatatcaagttccgtggcaagtccattgcagatgtactg
gccatgagtgtggatgaagccctaccctatttctcggctcagtctcgtattcgcgatagg
ttggccattctacaaaaagttggtctgggatacgtcgctttgggccagcaggcgacgact
ctttccggtggtgaagcgcagcgcgttaaactttccaaggaactggcacgtagggcaacg
gggcgtaccctgtatattctggatgaaccaacaaccggcctgcatacagaggatgtaaga
aagcttttggaagttttgcatgctcttgttgatcagggaaacacagttgttgtgattgag
cataatcttgaagttatcaaaacggcagactggattatagatgttggccccgagggaggt
gatggcggtgggcaaattgttgccgaaggtacgccagaagatattgcggcatgtccggaa
agttacacaggccggtttcttgccccgctgttagtgaagaaataa
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