Acyrthosiphon pisum (pea aphid): 100158913
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Entry
100158913 CDS
T01076
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
api03009
]
100158913
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100158913
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
Other ribosome biogenesis factors
100158913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SNF2-rel_dom
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
100158913
NCBI-ProteinID:
XP_001951890
APHIDBASE:
ACYPI000331
UniProt:
A0A8R2AC25
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Position
A1:complement(131786744..131790442)
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AA seq
570 aa
AA seq
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MALHVNAVRFGLQRICLAPVSFRYSRQAACRLGLEFSSRSNDFPKRTPNVRFLSSKNEKI
IDLSYSDIDPVYIPIKKEIVDEQDLHEEDQHSINSEIVIKCKRKHLNHERNQKYDKFKEI
PLASKGWKNKKAKDDYFTIHIYNDDYLPQSRKSFYEFKNTGLSQSILHILKQHEITIPSQ
IQALGIPSILRGNNTLLAAETGCGKTLAYLAPIIQQVLAYKEKVKFKNQFNSPLALVIVP
GRELADQIGEIANWFTEDLPLNVKVITGGHTKRQIVNPVFEENDIIIATLGALSKLTNSG
IYSMRYVRHVVLDEADTLMDDSFNELMTHFLSRFQFKGRNERSNLTQLLLVSATMPTSLS
DVLGDIIDMDSLNKIKTDKLHAILPHVQQRFIKTNLGEKPSILLLHAKKLSKSNTPTIIF
CNKSSTCDWATMFLNENGIEAVNLHGDMLYEIRLGKFKKYQDGEVNIMVSTDVGSRGLNT
IRTKHIINYDFPTYIADYIHRCGRTGRLNAGTDGKVTNFISTNNDSELVQKIELAARTMK
SLPNVNGNITKIRRFFILNQLENKAAKKLD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcacgttaatgcagtaagattcggtttacagaggatttgtttggcacctgtg
tcgtttcgatacagtagacaagccgcatgccgtttgggtttggaatttagttccagatct
aatgatttccctaaacgtaccccaaacgtacgattcttaagctcaaaaaatgaaaaaatt
atcgatcttagttactccgacattgatccagtgtatatacctattaagaaagaaattgtt
gacgaacaagatttacatgaagaagatcagcattcaatcaattctgaaattgttattaaa
tgtaaaagaaaacatttaaatcacgagagaaatcagaaatatgataaattcaaagaaatt
ccactggcatcaaaaggatggaagaacaagaaggctaaagatgattattttactattcat
atttataatgatgattatttacctcaaagtagaaagagtttttatgaatttaaaaacact
ggactatcacaatctattcttcatattttaaaacaacatgaaatcactattccctcacaa
attcaagctcttggaattccatcaatactaagagggaataatactttgcttgcagctgaa
acaggttgtggtaaaacattagcatacttggcaccaataattcaacaagtattagcttat
aaagaaaaagtaaaatttaaaaatcagttcaacagcccattagccttagttattgtacct
ggcagagaattagctgatcaaattggagagattgccaattggtttactgaagatttacca
ttgaatgtaaaagtaattactggaggacacacaaaaaggcagatagttaatccagttttt
gaggaaaatgatataattattgctacattaggagctttgagcaaattaacaaacagtggc
atatactcaatgcgttatgtacgtcatgttgtactagatgaagcagatactttaatggac
gatagttttaatgagttaatgactcatttcttatctagattccaatttaaaggtcgtaat
gaaaggtctaatttgactcaattgttgttggttagtgccacaatgccaacaagtctatcc
gatgtattgggtgatataatcgatatggatagtttgaacaagatcaagacggataaatta
catgccattcttcctcatgttcaacaaagatttattaaaactaatctgggtgaaaagcca
tcaattctgttgttacatgcaaaaaaactttctaaaagcaatactccaacaataatattt
tgtaataaatcaagtacttgtgattgggctacaatgtttttaaatgaaaacggcatcgag
gcagtaaatttgcacggtgatatgctgtatgaaattagacttggaaaattcaaaaaatat
caagatggcgaagtcaacattatggttagcacggatgtgggatccagaggattaaataca
attagaactaagcatattataaattatgactttcctacctatattgctgattatattcat
cgatgtgggcgtactggacgtttaaatgctggtacagatggaaaagtcaccaattttatc
agtacaaataatgattccgaattggtccaaaaaattgaattagctgcacgcactatgaaa
tctttaccaaatgtcaatggaaatataactaaaatacgaagattcttcatattgaaccaa
ctggaaaacaaagcagccaaaaaattagattaa
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