Acyrthosiphon pisum (pea aphid): 100168286
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Entry
100168286 CDS
T01076
Name
(RefSeq) collagen alpha-1(III) chain
KO
K06236
collagen type I alpha
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api04512
ECM-receptor interaction
api04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
api00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100168286
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100168286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
api00536
]
100168286
Glycosaminoglycan binding proteins [BR:
api00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100168286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
100168286
NCBI-ProteinID:
XP_001942985
APHIDBASE:
ACYPI009002
UniProt:
A0A8R2A499
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Position
A2:54503639..54513301
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AA seq
999 aa
AA seq
DB search
MNSSFLRLLCTLFALSHYALAQSGYNYNKPSNPLNGPTTAIPGTSYPTSFPTTVSSYPTQ
ADQFGSTGATGTPSFTGGYGGQTAYPTSAPQDFTTANFPSSTAQRPGNFPTGSGSSPGYG
SSGDGSSGPNTRPSYGPSGQESLGAPQSGNGYGVGSGSSFGSGSSKPSGFGGSSGTPSST
GFGSGNAPGSYGSGNNVGTTGFGSGSAPGSYGSGNNVGTTGFGSGSAPGSYGSGNNVGTT
GFGSGNAPGSYGSGNNAGTTGFGSGNAPGSYGSGNNVGTTGFGSGNAPGYGGSGGSVPGT
GFGSNQGSSGFGIGSAPGNYGSNNVGTQGPNSFGNGVGGGSRPSYGGAGIGGPSSVGGGN
AGVQGPSSFFGGNGGSQGPSSVGGGNAGVQGPSSFFGGNGGSQGPSSVGGGNAGVQGPSS
FFGGNGGSQGPASFGNGFGSGNSPTGNNDDGSYEGGDFSAIPGEPGTDYPILSEIPNTSF
TCNQRLPGYYADTETRCQVFHICSNDIKYDFLCPNGTIFHQQHFVCVWWNQFDCSTAESL
YGLNANIYDYSKVGSPGQSGPQGPIANFPGQVGPNGPIGNYPGLSGPQGPIANFPIISGP
QGPVANYPGQSGSQGPTANYPGQIGPQGPTANYPGQSGPQGPTANYPGQSGPQGPTANYP
GQTGPQGPTANYPGQSGPQGPTANYPGQSGPQGPTANYPGQTGPQGPTANYPGQSGPQGP
TANYPGQSGPQGPTANYPGQTGLQGPTANYPGQSGPQGPTANYPGQSGPQGPTANYPGQS
GPQGPAANYPGQSGSQRPTANYPGQSGLQGPTANYPGQSGSQSPSANYPGQYGPQGPSAS
YPGQSGIKGPSANYPGQSGPQGPSANYPGQSGSQGPSANYPGQIGSQGPTANYPSQTGAL
FPSQRPSSYPGAQATPSYPSTGVNNNGRPSSQGPFGSSGTTPYPSQGSTVGSYGPSSTLS
GASPTSASYPGSTLSDAQFVNSYNKPPVPDREYLPPYKK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtctttcttgcggttgctgtgcaccctctttgcactatcccattatgcattg
gctcaaagtggttataattacaacaaaccatcaaatcccctgaacggcccaactacagca
atacccggcactagctatcctacttcattccctacaacggtttcgtcatacccaactcag
gctgaccaatttggttctactggagctactggtacgcccagttttactggtgggtatggt
ggccaaacagcctatccaacatctgcacctcaagatttcactactgctaacttccctagt
tcaactgcacaacgacctggaaacttccctactggttcaggttcatcgcctggatatggc
tcatctggtgatggttcttctggaccaaacacaagaccaagctatggtccaagtggacaa
gaaagcttaggagcccctcaaagtggtaatggatatggtgttggttcaggatctagtttt
ggatctggaagttcaaaaccaagcggatttggtggaagttcaggaacaccaagttcaact
ggttttggaagtggaaatgcaccgggtagttatggaagtggaaacaatgtaggaactact
ggatttggaagtgggagtgccccaggtagttatggaagtggaaacaatgtaggaactact
ggatttggaagtgggagtgccccgggtagttatggaagtggaaacaatgtaggaactact
ggatttggaagtggaaatgctcctggtagttatggaagtggaaataatgcaggaactact
ggatttggaagtggaaatgccccaggtagttatggaagtggaaacaatgtaggaactact
ggatttggaagcggaaatgctcctggttatggtggtagtggtggttctgtaccaggaaca
ggttttggaagcaaccagggatcaagcggttttggtataggtagtgcacctggcaattat
ggaagtaataatgttggaacacaaggaccaaatagttttggcaatggtgttggtggtgga
tccaggccaagttatggaggcgccggaattggtggacctagcagtgtaggcggtggaaat
gctggtgtacaagggcctagcagtttctttggtggaaacggtggtagccaaggacctagc
agtgttggaggtggaaatgctggtgtacaaggacctagcagtttctttggtggaaacggt
ggtagccaaggacctagcagtgttggaggtggaaatgctggtgtacaaggacctagtagt
ttctttggtggaaatggtggtagtcaaggacctgctagttttggaaacggctttggatct
ggaaactcgcctactggaaataatgatgatggttcttacgaaggtggtgacttttctgct
atacccggagaaccaggtactgactacccaatactatcagaaataccaaatacttcattt
acttgtaaccagagattaccaggatactacgctgataccgaaaccagatgtcaagtattc
catatatgttctaatgatattaaatacgatttcttgtgccctaatggaacaatattccac
caacaacactttgtatgtgtctggtggaaccagtttgattgttcaactgctgaaagtcta
tatggcttgaacgctaatatttatgactactcaaaagtaggttctccaggacaatcaggc
ccacaaggtcctatcgctaacttccctggacaagttggtcctaatggaccaattggtaat
taccccggtttatctggaccacaagggccaattgctaacttcccaataatttctggtcca
caaggcccagttgcaaactacccaggacaatcaggatcacaaggaccaacagccaattat
ccaggccaaattggtccccagggtccaacagccaactacccgggacagtctggtcctcaa
ggtccaaccgccaactacccaggacaatcaggaccacaaggaccaacagccaattatcca
ggccaaactggtccccagggtccaacagccaactacccgggacagtctggtcctcaaggt
ccaaccgccaactacccaggacaatccggaccacaaggaccaacagccaattatccaggc
caaactggtcctcagggtccaacagccaactacccgggacagtctggtcctcaaggtcca
accgccaactacccaggacaatcaggaccacaaggaccaaccgccaattatccaggccaa
actggtcttcagggtccaacagccaactacccgggacagtctggtcctcaaggtccaacc
gctaactacccaggacaatcaggaccacaaggcccaaccgccaactacccgggacagtct
ggtcctcaaggcccagccgccaactacccaggacagtcaggttctcaaaggccaactgcc
aactatccaggtcaatctggtctccaaggcccaacagctaactacccagggcagtctggt
tctcaaagtccatctgccaactacccaggacaatatggtccacaaggtccatcagccagc
tatccaggccaatcaggtatcaaaggtccatctgccaactatccaggtcaatcgggtccc
cagggtccatctgccaactacccaggacagtctggttctcaaggtccgtcagccaactac
ccaggacaaataggatcacaaggcccaacagcaaattatccatcacagacaggtgcacta
ttcccgagtcaacgtccaagtagctacccaggtgcacaagctacaccatcatacccatct
acaggtgtgaacaataacggtcgaccaagttctcaaggtccatttggaagttcaggcaca
acaccttaccccagtcaaggaagtactgtgggatcatatggtccaagctcaactttatca
ggtgcatcaccaacttctgcctcatacccaggatcaactttatctgatgcgcagtttgtt
aactcttacaataaaccacccgtaccagacagggaatatttgccaccgtataaaaaatga
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