Apibacter sp. B2966: G8C43_02395
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Entry
G8C43_02395 CDS
T06471
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
apib
Apibacter sp. B2966
Pathway
apib00540
Lipopolysaccharide biosynthesis
apib01100
Metabolic pathways
apib01250
Biosynthesis of nucleotide sugars
Module
apib_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
G8C43_02395 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
apib01005
]
G8C43_02395 (kdsA)
Enzymes [BR:
apib01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
G8C43_02395 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
apib01005
]
Lipid A
G8C43_02395 (kdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
DUF5091
Motif
Other DBs
NCBI-ProteinID:
QII71669
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All DBs
Position
561362..562180
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AA seq
272 aa
AA seq
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MKNSLYSIPKIKNTTTNNFTLIAGPCIIEGEQMAMDIAGKIVEITDKLGIPYIFKGSFKK
ANRSRVDSFTTIGEQKSLEILKKVGDTFSIPTTTDIHENEHAQWAAKYVDVLQIPAFLVR
QTDLLVAAAKTGKYITLKKGQFLSPEAMQFAAQKIKDSGNSNYAIIDRGTSFGYHDLIVD
YRGIPTMRNYAPVILDVTHSLQQPNQTTGVTGGRPDMIETIAKAGIAVGADGIFIETHPN
PEIALSDGANMLKLDLLENLLEKLVKIRKAIS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagcttatattcaattcctaaaataaaaaatacaactactaataatttcact
ttaattgcaggaccttgtattattgaaggtgagcaaatggctatggatattgccggaaaa
attgttgaaattactgataaattaggtattccttatatctttaaaggttctttcaaaaag
gcaaatcgatcaagagttgacagcttcaccacgattggagaacaaaaatcgttagaaata
ttaaaaaaagttggtgatacgttttcaatacccaccactaccgatattcatgaaaacgaa
catgctcaatgggctgcaaaatatgtggatgtattacaaattcctgcttttttggttaga
caaaccgatttgttagttgcggctgcaaaaaccggaaagtatattaccttaaaaaaaggt
cagtttttgtcaccagaagccatgcaatttgccgctcaaaaaataaaagattcaggaaat
tccaactatgcaattattgatcgaggaacttcttttggatatcatgatttaattgtagat
tacagaggaataccaactatgaggaactacgctcctgtaatattagatgttacgcattca
ttacaacaacccaatcaaacaaccggtgtaacgggaggaagacccgatatgattgaaact
attgctaaagcaggtattgccgttggtgctgatggaattttcattgaaacccatccgaat
cctgaaattgctctttccgatggtgcaaatatgttaaaactggatttactggaaaacttg
ttggaaaaattggtaaaaataagaaaagccatcagttag
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