Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_1105
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Entry
APL_1105 CDS
T00476
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Pathway
apl03030
DNA replication
apl03430
Mismatch repair
apl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APL_1105 (dnaE)
03430 Mismatch repair
APL_1105 (dnaE)
03440 Homologous recombination
APL_1105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apl03032
]
APL_1105 (dnaE)
03400 DNA repair and recombination proteins [BR:
apl03400
]
APL_1105 (dnaE)
Enzymes [BR:
apl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APL_1105 (dnaE)
DNA replication proteins [BR:
apl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APL_1105 (dnaE)
DNA repair and recombination proteins [BR:
apl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APL_1105 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABN74197
UniProt:
A3N1B1
LinkDB
All DBs
Position
1277313..1280789
Genome browser
AA seq
1158 aa
AA seq
DB search
MTQQRFVHLKVHSDFSMINGLAKVKPLVKAAVANNMVAMALTDFSNFCGLVKFYGEALGS
GLKPIIGADIFVRPEPDSEDFFELTLLAKNNTGYHNITLLLSKAYQQGYVEFPLVEKAWL
AELNEGIIVLSGGRNGDVGKALLKENQAEADELVGFYQQYFPNHYYLALCRTGRADEERY
IQQAVPFSQKHQLPLVAVNDVVFLKEDDFDAHEIRVAIHDSYTLDDPKRPKKYSPQQYFR
SEQEMCALFADLPQAVENTVQIAMRCNVTVRLGEYFLPNFPTGDLSTEDFLVKKSREGLE
ERLEFLFPDPEERKNKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVADT
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYNFVDRISKLIPPDPGMTLAKAFDAEPKL
PELYEADEEVKDLIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSEGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINQRLAREGKEPVRIESIPLDDKKSFDLLL
ASKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGNEEV
SYPDAQYQHESLKPILDPTYGVIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
AQREIFEKGAIKQGVDGDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGFYDECINMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGV
GEGPVEAILEAREKDGIFKDLFDLTARVDLKKINRRTFEGLIMSGAFDKLGPHRAALMKN
LEDALKASDQHSKMEALGQSDMFGVLTETPEEVQNAYANTPKWSEQTILEGERTTLGLYL
SGHPIGRFLKELSHYAPVRLNELQPTRRGQVVTVAGIIMGSRIAVTKRGSRLGIATIEDR
SGKLDMTLFSEALETYGHLLEKDRIVIATGSVQFDDFSGGLKMSVREIATLDEARSRYAK
SLALAVSQEQLTPQFVKELREIIEPNKEGTLPLHFYYQSPEGRALLRSGIEWRVTPKDEM
LDQLKALLGENAVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacaacgtttcgttcatcttaaagttcatagtgatttctctatgattaacggt
ttggctaaagtaaaaccgttagtcaaagcggcagttgccaacaatatggtggcaatggca
ttaaccgatttcagcaacttttgcggattggtgaaattttatggcgaagcgttaggttcc
ggattaaaaccgattatcggtgcggatattttcgtgcgtcccgaaccagacagcgaagat
ttctttgagctgactttactagccaaaaacaacaccggttatcacaatattactctttta
ctttcaaaagcttatcaacaaggttatgttgaatttccgttagtcgaaaaagcgtggctt
gccgagttaaatgagggcatcattgtgctttccggcggacgcaacggcgatgttggaaaa
gctctactcaaagaaaatcaagcggaagcggacgagttagtcggcttttatcagcaatat
ttcccaaatcattactatcttgccctctgccgcaccggtcgtgcggatgaagaacgctat
attcagcaagcggtgcctttttcacaaaaacatcaattaccgttagttgcggtaaatgac
gtggtattcttgaaagaggacgattttgatgcgcacgaaattcgtgtagcaatccacgac
agctacaccttggatgatccgaaacgtccgaaaaaatattcaccgcaacaatatttccgt
agcgaacaagaaatgtgcgccttgtttgccgatttaccgcaagcggtcgaaaatacggta
caaattgcaatgcgttgcaatgtgaccgtacgtttaggcgaatatttcttaccgaatttc
ccaaccggcgatctttctaccgaagattttttagtgaaaaaatcacgtgaaggcttggaa
gaacgtttggaatttctgttccctgatccggaagaacgcaaaaacaagcggtccgtttat
gatgaacgtttgcaagtcgaactggatgtaattaaccaaatgggcttccccggctacttc
ctaatcgtaatggaatttattcagtggtcgaaagataacgatattccggttggtccgggg
cgtggttccggtgcgggttctttagtggcgtatgcgttaaaaattaccgatttagacccg
cttgccttcgacctgctctttgagcgtttcctaaatccggaacgtgtttcaatgcccgat
ttcgatgtcgatttctgtatggacggacgagatcgtgtgattgaacatgttgccgacact
tacggtcgccaagcagtttcgcagatcattaccttcggtacgatggcggcaaaagcggta
atccgagatgtaggccgtgtgcttggtcatccgtataattttgtcgatcgcatttctaaa
ctgattccgccggatccggggatgaccttggctaaagcatttgatgccgagccgaaactg
ccagaactttacgaagccgatgaagaagtgaaagacttgattgatatggcacgtaaactg
gaaggtgtgacccgaaatgctggtaaacacgccggtggcgtggttatcgcaccaacggca
attaccgatttctcaccgctttattgcgattctgaaggactacatccggtaactcacttc
gataaaaacgatgtggaatatgccggtttagtaaaatttgactttttaggcttacggaca
ctcaccattattaaatgggcgttggagatgattaaccagcgtttagctcgagaaggcaaa
gagccggtacgtatcgaaagtattccgttggatgataagaaatccttcgatctgttactt
gcatctaaaacaacggcggtattccagctagagtcacgcgggatgaaagatctgatttca
cgtctgaagcccgactgttttgaagatattatcgcgttagtagcattattccgtcccggt
ccgcttgaatccggcatggtacaaaactttatcgaccgtaaacacggcaacgaagaagtt
tcttaccctgatgcacaatatcagcacgaatcgcttaaaccgattttggatccgacctat
ggcgttattgtttaccaagagcaggtaatgcaaatcgcacaggtacttgctggttatacc
ttaggcggcgcagacttattacgccgtgcaatgggtaagaaaaaaccggaagaaatggcg
gcgcagcgtgaaatcttcgaaaaaggggcgatcaaacaaggtgttgatggcgatcttgcg
atgaaaatctttgacttggtggaaaaattcgccggttatggttttaacaaatcgcactct
gccgcttatgcgttggtttcttatcaaacactgtggctgaaagcacactaccctgccgaa
tttatggcggcggtaatgacttcggagatggataataccgacaaaatcgttggcttctat
gacgaatgtatcaatatgggcttaaccgttgttccgcctgatgtaaacagtggtaaacac
cgtttttcagtgaacgaaaaaggcgagattgtttatggcttaggcgcaattaaaggtgtg
ggagaaggtccggttgaggcaattttagaagcgcgtgaaaaagacggtatcttcaaagat
ttatttgatttgaccgctcgtgtcgatttgaaaaaaatcaatcgccgtacctttgaaggt
ttaattatgtcgggtgccttcgataagttaggcccgcatcgtgccgcactgatgaaaaat
ttagaagacgcactgaaagcctccgatcaacacagcaaaatggaagcgcttgggcaaagc
gatatgttcggtgtgctaactgaaacaccggaagaagtacaaaatgcctatgcgaataca
ccaaaatggtcggaacaaaccattttagaaggtgaacgtaccacactcggtttatattta
agcggtcatccaatcgggcgattcttaaaagagttatcgcactatgcgccagtacgtcta
aatgaactgcaaccaacacgccgtggacaagtggtcaccgttgccggcattattatgggt
tcacgtattgccgtaaccaaacgaggcagccgtcttgggattgcgaccattgaagatcgt
tccggtaaattagatatgacactattttcggaagctctcgaaacttacggccatctttta
gagaaagatcgtattgtgatcgcaaccggttcggtacaattcgatgattttagcggcggg
ttaaaaatgtcagtgcgagaaatcgccacgttagatgaagctcgtagccgctatgcgaaa
agccttgctttagcggttagccaagaacagctcacaccgcaatttgtaaaagaattacga
gaaatcatcgaaccgaataaagaagggacgttaccgttacatttctattaccaaagtcct
gaaggcagagccttattgcgtagcggcatagaatggcgagtaaccccgaaagatgaaatg
ctcgaccaactcaaagctctactcggtgaaaacgccgtagaactggagttcgaataa
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