KEGG   Acanthaster planci (crown-of-thorns starfish): 110986732Help
Entry
110986732         CDS       T05078                                 

Definition
(RefSeq) DNA ligase 4-like
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    110986732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aplc03400]
    110986732
Enzymes [BR:aplc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     110986732
DNA repair and recombination proteins [BR:aplc03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     110986732
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C DNA_ligase_IV BRCT RNA_ligase LIG3_BRCT PTCB-BRCT mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 110986732
NCBI-ProteinID: XP_022104577
LinkDB All DBs
Position
Unknown
AA seq 925 aa AA seqDB search
MSDAGDLPSTSTADSVTVASRIPFAELAGFLEKVQKKHGTDGKRQMFREFLEKWREFHKQ
LHKNNLDTKDNFYPVLRLLLPQLERERVAYGIKEHTLAKLYIEILGLAKESTDAKKLLNY
RAPTAKQEAGDFASVAYFVLRNRCPEKGSLSIQDVNTCLDGIAASNAAKKKDVVKKNLMH
LLRNTSALEQKWLVRMIMKDMKSGLSQVSIFHAFHPDAEDFFNVTNNLSKLCADLRDPSV
RMNEVGISVFSAFSPMLGMRANLNQVEKLMEHKPFYIETKLDGERMQLHKEGNDYKYFSR
RSHDYSRSFGETPDDGSLTPYITNCFKRNVRNCILDGEMLAYNPDTKTFMTKGENFDIKT
LKDDEDLQVCYCVFDILLYNDKKLANLPLHERVEYIKEVFTPVEGRLHIVERREASSKQE
VVTALNDAIDNREEGIMIKNPNTTYLPDRRKGSGWLKIKPEYVDNLMDELDLLVVGGFFG
KGIRSQMVSHFLLAVAEPPEVPGEHPVKFIAFAKVGSGYTLKELYDFNQRLLPHLKVFKK
ENPPSFLQFTKEKPDMYVKPQHSFILQVKATEINSSTSYPTGCTLRFPRVEKVREDREWH
QCMTTDELENLRQASEGKLATKYAGLEGDEDVPSKKRKVATRTAKPVGVAARFMAADVSE
VTKVSEMFAEREFCVINGPPSHSKTELEKKIVEYGGQVVQNPGYETFCVLADKVNLKVRN
IISCDIYDVVRTEWLLTCLEEKKCLPWLPSHMIHVSPETKEQFSLLYDRHGDSYTEDVDA
EKLKEIFDKVGQEGDYHMLDSEAIAELEQKYFPGESPLGLFRLCKVYMDSTLIISDQSTH
IKDCSLDLVAMEMRFYGATVSPKMADDITHVVLDHSDKTRLPSYKKLLRQRRSKFHLVSP
EWVHACIEAGKMLSERRFELGLPAD
NT seq 2778 nt NT seq  +upstreamnt  +downstreamnt
atgtcagatgctggcgatttgccgtcgacatcgactgctgactcagttacggtggccagt
cgcatcccgtttgctgagcttgctggcttcctggaaaaagtccaaaagaagcacggcaca
gacggcaagagacagatgtttcgtgagtttcttgagaagtggcgcgaatttcacaaacag
ctgcacaagaataatctagatacgaaagacaacttctaccccgtcttgaggcttctccta
ccccaactggagagagaaagggttgcctacgggatcaaggagcataccctggccaagctc
tacattgaaatcctcggtttggccaaagaaagcactgatgccaagaagctgctcaactac
agggcgccgaccgcaaagcaggaagctggggactttgccagtgtcgcgtactttgtccta
aggaacaggtgccctgagaaaggaagtttgagcattcaggacgtcaacacctgcctggat
ggcatagcggccagcaacgccgcaaagaagaaagacgtagtcaagaagaacctcatgcac
ctcttacggaacactagcgccctcgagcaaaaatggcttgtcagaatgatcatgaaggac
atgaagtctggactgagccaagtgtccatattccatgctttccatcctgatgctgaagac
ttttttaatgtcacaaacaacttgtccaagctttgtgctgacttgagggaccccagtgtg
cggatgaacgaagtcggaatctctgtcttctcagcgttcagccccatgctgggcatgagg
gcaaatctcaaccaggtcgagaagttgatggagcacaagcccttctacatcgagacgaag
ctggatggagagaggatgcagctgcataaggaaggaaatgactacaaatacttctcaaga
cgatcacatgactactctcgatcgtttggtgagactccagatgatggcagcctcactccc
tacataacaaactgcttcaaaaggaatgttcgtaactgtatcctggatggagagatgctt
gcctacaatccagacacgaagacattcatgacgaagggtgaaaattttgacataaagacc
ttgaaagatgacgaagatctccaagtctgctactgcgtgtttgacattcttctctacaat
gacaagaaactggccaacctccctcttcatgaacgagtcgagtacatcaaggaagtgttc
actcctgttgaaggcagacttcacattgtggagagacgggaagcaagttcaaagcaggag
gtcgtgacagctttgaatgatgccatcgacaaccgggaagaaggaattatgatcaagaac
cccaacaccacctacctgccagacaggaggaaaggcagtggatggctgaagatcaagcca
gagtacgtggacaatcttatggatgagttggatctcttggtggtagggggtttctttggc
aaggggattcgatcccagatggtatctcacttcctattggctgttgctgagcccccagaa
gtgcctggagagcatcctgtcaaatttattgcctttgcaaaggttgggtccggttacaca
cttaaagaattgtatgacttcaaccaacgcctgctcccacacttgaaagtctttaagaag
gaaaaccctccttcgtttctccaattcacgaaggaaaagccagacatgtatgtcaaacca
caacattccttcattctccaagtgaaagcgacagaaataaactcttcaacaagctaccca
actgggtgcacgcttcgtttcccgcgggtggaaaaggtgcgagaggacagggagtggcac
caatgcatgacgacggatgagctggaaaatctaagacaggcatcggagggcaagctagca
acaaagtatgctggcctggagggggacgaagatgtaccaagcaagaagaggaaggtagcc
actcgaacggctaagcctgtcggcgtggctgctcgcttcatggccgctgatgtttcagag
gtcacaaaggtgtcagagatgtttgccgagcgcgaattttgtgtcatcaacggaccaccc
agccactccaagacagagttggagaagaagatcgtggagtacggagggcaggtggttcag
aacccggggtatgaaacgttctgcgtcttagccgacaaggtcaacctgaaagtgcggaac
atcatcagctgtgatatctatgatgtggtcagaacggagtggcttctgacatgtttggag
gagaagaaatgccttccttggctaccaagtcacatgattcacgtctccccagaaaccaaa
gaacagttttcattgctgtacgatcgtcatggggatagctacacagaagatgtggacgcg
gagaagctcaaggaaatctttgacaaagtcggtcaagagggcgattatcatatgctcgac
agcgaggccatcgcggagctggaacagaagtattttcccggggagtcccccttggggctg
ttccgactctgcaaggtgtacatggactcaactctcatcatcagtgaccaatcaactcac
ataaaagactgcagcttggatctggttgccatggagatgcgtttctatggtgccaccgtc
tcacccaagatggctgatgacatcacccatgttgtcttggatcacagtgacaagacacgg
cttccctcgtacaagaaattgctgagacagcgaaggagtaagtttcatctggtgtcgccg
gagtgggtgcacgcttgcatcgaggcaggcaagatgctgtcagaaaggaggtttgaactg
ggcctgccagccgattag

DBGET integrated database retrieval system