Alpha proteobacterium HIMB5: HIMB5_00006580
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Entry
HIMB5_00006580 CDS
T02250
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm03030
DNA replication
apm03430
Mismatch repair
apm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HIMB5_00006580
03430 Mismatch repair
HIMB5_00006580
03440 Homologous recombination
HIMB5_00006580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apm03032
]
HIMB5_00006580
03400 DNA repair and recombination proteins [BR:
apm03400
]
HIMB5_00006580
Enzymes [BR:
apm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HIMB5_00006580
DNA replication proteins [BR:
apm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HIMB5_00006580
DNA repair and recombination proteins [BR:
apm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HIMB5_00006580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_24
AAA_14
AAA_19
AAA_16
RNA_helicase
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFS47418
UniProt:
J9YV75
LinkDB
All DBs
Position
601016..601933
Genome browser
AA seq
305 aa
AA seq
DB search
MNLDPFKQLQLYGYKNYFNELKNLYIKNKLPNKILLNGKKGIGKCTFANHFINFVLSNDE
DNKYDDNNYLINSNNRSFKLITNKSSPNFFLVRPKEEKKNIEIDQIRELISFCNKSSFND
KPRFVIIDDIECLNLNSSNALLKILEEPNNGIYFILINNSSKILSTIKSRCLTFNISFNF
EIIKKIVSQITKLEINELISEDLICHYFTIGDYLSIFEFSKTNKLDLSNLSLKDFIKIIV
KDRIYKKDKILNKLIYDFIELYYLKKEPSEQNYLNFDDHIRSVNNMSKFNLDTESIFLRL
HQNLN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatccttttaaacaactacaattgtatggatataaaaattattttaatgaa
ttaaaaaatttatatataaaaaataaattaccaaataaaatacttttaaatggaaaaaag
ggaataggtaaatgcacttttgctaatcattttataaattttgttttatcaaatgatgaa
gataataaatatgatgacaataattatcttataaattccaataatagatcttttaaactt
atcactaataaatcatcaccaaatttttttttagttagaccaaaggaagaaaaaaaaaat
attgaaatagatcaaattagagaactaattagtttctgcaataaatcatcatttaatgat
aaaccaagatttgtaataattgatgatattgaatgtctaaaccttaattctagtaatgct
ttattgaaaattttagaggaacctaataatggaatttattttatattgataaataattcc
tcaaaaatattatctaccatcaaatcaagatgtttaacttttaatataagttttaatttt
gaaattataaagaaaattgtttctcaaattacaaaattagaaattaacgaactaatttct
gaagatttaatttgtcattattttacaataggggattatctttcaatttttgaattttca
aaaactaataaacttgatttatcaaatttaagcttaaaagactttattaaaattatcgtg
aaagatagaatttataaaaaagacaaaattttgaataaattaatttacgatttcattgaa
ttatattatttaaaaaaagaaccttcggaacaaaattatcttaactttgatgatcatatt
agatctgtaaataatatgtcaaaatttaatcttgatactgaaagtatttttcttagattg
catcaaaatttaaattaa
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