KEGG   Alpha proteobacterium HIMB5: HIMB5_00006580
Entry
HIMB5_00006580    CDS       T02250                                 
Name
(GenBank) hypothetical protein
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
apm  Alpha proteobacterium HIMB5
Pathway
apm03030  DNA replication
apm03430  Mismatch repair
apm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HIMB5_00006580
   03430 Mismatch repair
    HIMB5_00006580
   03440 Homologous recombination
    HIMB5_00006580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apm03032]
    HIMB5_00006580
   03400 DNA repair and recombination proteins [BR:apm03400]
    HIMB5_00006580
Enzymes [BR:apm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HIMB5_00006580
DNA replication proteins [BR:apm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HIMB5_00006580
DNA repair and recombination proteins [BR:apm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HIMB5_00006580
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_24 AAA_14 AAA_19 AAA_16 RNA_helicase NACHT AAA_22
Other DBs
NCBI-ProteinID: AFS47418
UniProt: J9YV75
LinkDB
Position
601016..601933
AA seq 305 aa
MNLDPFKQLQLYGYKNYFNELKNLYIKNKLPNKILLNGKKGIGKCTFANHFINFVLSNDE
DNKYDDNNYLINSNNRSFKLITNKSSPNFFLVRPKEEKKNIEIDQIRELISFCNKSSFND
KPRFVIIDDIECLNLNSSNALLKILEEPNNGIYFILINNSSKILSTIKSRCLTFNISFNF
EIIKKIVSQITKLEINELISEDLICHYFTIGDYLSIFEFSKTNKLDLSNLSLKDFIKIIV
KDRIYKKDKILNKLIYDFIELYYLKKEPSEQNYLNFDDHIRSVNNMSKFNLDTESIFLRL
HQNLN
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaatttagatccttttaaacaactacaattgtatggatataaaaattattttaatgaa
ttaaaaaatttatatataaaaaataaattaccaaataaaatacttttaaatggaaaaaag
ggaataggtaaatgcacttttgctaatcattttataaattttgttttatcaaatgatgaa
gataataaatatgatgacaataattatcttataaattccaataatagatcttttaaactt
atcactaataaatcatcaccaaatttttttttagttagaccaaaggaagaaaaaaaaaat
attgaaatagatcaaattagagaactaattagtttctgcaataaatcatcatttaatgat
aaaccaagatttgtaataattgatgatattgaatgtctaaaccttaattctagtaatgct
ttattgaaaattttagaggaacctaataatggaatttattttatattgataaataattcc
tcaaaaatattatctaccatcaaatcaagatgtttaacttttaatataagttttaatttt
gaaattataaagaaaattgtttctcaaattacaaaattagaaattaacgaactaatttct
gaagatttaatttgtcattattttacaataggggattatctttcaatttttgaattttca
aaaactaataaacttgatttatcaaatttaagcttaaaagactttattaaaattatcgtg
aaagatagaatttataaaaaagacaaaattttgaataaattaatttacgatttcattgaa
ttatattatttaaaaaaagaaccttcggaacaaaattatcttaactttgatgatcatatt
agatctgtaaataatatgtcaaaatttaatcttgatactgaaagtatttttcttagattg
catcaaaatttaaattaa

DBGET integrated database retrieval system