Actinobacillus porcitonsillarum: DDU33_07565
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Entry
DDU33_07565 CDS
T05443
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
apor
Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apor03016
]
DDU33_07565
Enzymes [BR:
apor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DDU33_07565
Transfer RNA biogenesis [BR:
apor03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DDU33_07565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
Motif
Other DBs
NCBI-ProteinID:
AWI51349
UniProt:
A0A2U8FK40
LinkDB
All DBs
Position
1582426..1584417
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AA seq
663 aa
AA seq
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MFQNNPLLAQLKQQIEASKEYVEGRVKTSDKAYGFLECEKESFFIPPAEMKKVMHGDTVK
AVVKREGDKASVEIDSLIEPMLDRFIAQVRYNKDNKLQLLVDHPSIKAPMPANTHKKVTE
TLENGDWVVAQLRTHPLRDDRFFFAQVTQFICKESDHFAPWWVTLARHEQPREPVATEKH
YALNDELERQDLTDLYFTTIDSASTQDMDDALYISPIEENGVQTGWRLVVAIADPTAYIP
ENSQIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVANEKRPALVGFIETDLEGNIVK
QAEFVSAWVESKAKLVYDNVSDYLEGVENAWQPENAQVKQQIDWLHQFTQARINWRKNNA
LVFKEQGDYSFELNEDGSVRDIHIEYRRIANQIVEESMIIANICAAQFLDANAQTGVFNT
HAGFDPKNYEAVKTFLLNTLTNENTDEATLATLNERYSSERLATLDGYCEMQRDVRDFPE
NFLELRLRRYLTFAEFKAEVAPHFGLGISHYATWTSPIRKYGDMVNHRIIKQILQGKSVN
PVETSILERLQEARKQNRMVERDVADWLYARYLFPMVEQAVEFECEIADVSRGGIRARVL
ENGASIFVPYSTLHDNKDEMDYRSEEIALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGN
IVQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaacaatccattattagcgcagttaaagcaacaaattgaagcgagcaaagaa
tacgttgaaggacgtgtcaaaacctcagataaagcttatggcttcttagaatgtgaaaaa
gagagcttttttattccaccagcagaaatgaaaaaagtaatgcacggcgatacggttaaa
gcggtggttaaacgtgaaggcgataaggcgtcagtagaaattgatagcctaattgaacca
atgttagatcgctttattgcacaggtgcgttataacaaagataacaagcttcaattattg
gtagatcatccaagtattaaagcgccaatgcctgcgaacacccataaaaaggtaacagag
acattagaaaatggcgattgggttgtcgcacaattgcgtacgcacccattaagagatgat
cgcttcttcttcgcacaggttacacagtttatttgtaaagaaagtgatcattttgcaccg
tggtgggttacattagcacgccacgagcaacctcgtgaaccggttgccacagaaaaacat
tacgcattaaatgatgaattagaacgtcaagatcttaccgatctctattttaccaccatt
gatagcgcctctactcaagatatggacgatgcgttatatatctcgccaatcgaggaaaat
ggtgttcaaacaggctggcgtttagtggttgcgattgccgatcctactgcgtatatccca
gaaaattcacaaattgaaaaagcggctcgtcagcgttgttttacgaactatttaccgggt
tttaatatcccaatgttgccgagagagttatctgatgatctttgctctttagttgcaaat
gaaaaacgtcctgccttagttggttttattgaaacggatcttgaagggaacattgttaaa
caagcggagtttgtctctgcttgggtagaaagcaaagctaaattggtttatgacaatgtg
tcagattatctagaaggcgttgaaaatgcgtggcaaccggaaaatgcacaagtcaaacag
cagattgattggttacaccaatttacacaagctcgcattaactggcgcaaaaacaatgcc
ttagttttcaaagaacaaggcgattattctttcgaattaaatgaagacggttcggtacgc
gatattcatattgaatatcgccgtattgccaatcaaattgtcgaagagagtatgattatt
gcgaacatttgtgccgcacaattcttagatgctaacgcacaaacaggggtatttaatact
cacgcaggttttgatcctaaaaattatgaagcggtaaaaacctttttattaaatacgtta
acgaatgaaaacactgatgaagcgacattagcaacattgaacgaacgctattcaagcgaa
cgtttagcgaccttagatgggtattgtgagatgcaacgtgatgtgagagatttcccggag
aatttccttgaattgcgtttacgccgttatctgacatttgccgaatttaaagcagaagtt
gcaccgcatttcggtttaggtattagccattatgccacttggacttcaccaattcgtaaa
tatggcgatatggtaaatcatcgaattatcaaacagatcttacaagggaagtcggttaat
ccggtagaaacctcgattttggaacgattacaggaagctcgtaagcaaaatcgaatggta
gaaagagatgtggcagattggttatatgctcgctatctcttcccaatggttgaacaagcg
gttgaatttgaatgtgaaattgcagatgtttcccgtggaggcatccgagcacgtgtatta
gaaaatggtgcttctatttttgtaccttattcaacgttacacgataacaaagacgaaatg
gattaccgtagcgaagaaatcgccctttatattaaaggggaaaaagcttaccaaatcggg
caagcggttaaagtaaaattaacagaagttcgcttagaaacacgctctattgttggtaat
attgttcaatag
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