Actinobacillus porcitonsillarum: DDU33_10500
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Entry
DDU33_10500 CDS
T05443
Name
(GenBank) HU family DNA-binding protein
KO
K05787
DNA-binding protein HU-alpha
Organism
apor
Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apor03032
]
DDU33_10500
03036 Chromosome and associated proteins [BR:
apor03036
]
DDU33_10500
03400 DNA repair and recombination proteins [BR:
apor03400
]
DDU33_10500
DNA replication proteins [BR:
apor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DDU33_10500
Chromosome and associated proteins [BR:
apor03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DDU33_10500
DNA repair and recombination proteins [BR:
apor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DDU33_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
Arteri_nsp7a
Big_11
HU-DNA_bdg
NA37
Motif
Other DBs
NCBI-ProteinID:
AWI51881
UniProt:
A0A2U8FLG3
LinkDB
All DBs
Position
2196257..2196529
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AA seq
90 aa
AA seq
DB search
MNKSELIDAIAAKAELSKKDAKAALEATLEAVSESLKAGDTVQLIGFGTFKVNERAARTG
RNPRTGEEIKIAAAKIPAFVAGKALKDLVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagtgaattaatcgatgctatcgcagcaaaagcagaattaagcaaaaaagat
gcaaaagcagctttagaagcaacattagaagcagtatctgaaagcttaaaagcaggcgat
accgttcaattaatcggttttggtacattcaaagtaaatgagcgtgctgctcgtactggt
cgtaacccacgtactggtgaagaaatcaaaattgcagctgcaaaaatcccagcattcgtt
gcaggtaaagcattaaaagatttagtaaaataa
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