KEGG   Actinobacillus porcitonsillarum: DDU33_10500
Entry
DDU33_10500       CDS       T05443                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K05787  DNA-binding protein HU-alpha
Organism
apor  Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:apor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apor03032]
    DDU33_10500
   03036 Chromosome and associated proteins [BR:apor03036]
    DDU33_10500
   03400 DNA repair and recombination proteins [BR:apor03400]
    DDU33_10500
DNA replication proteins [BR:apor03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DDU33_10500
Chromosome and associated proteins [BR:apor03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DDU33_10500
DNA repair and recombination proteins [BR:apor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DDU33_10500
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 HU-CCDC81_euk_1 Arteri_nsp7a Big_11 HU-DNA_bdg NA37
Other DBs
NCBI-ProteinID: AWI51881
UniProt: A0A2U8FLG3
LinkDB
Position
2196257..2196529
AA seq 90 aa
MNKSELIDAIAAKAELSKKDAKAALEATLEAVSESLKAGDTVQLIGFGTFKVNERAARTG
RNPRTGEEIKIAAAKIPAFVAGKALKDLVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaagtgaattaatcgatgctatcgcagcaaaagcagaattaagcaaaaaagat
gcaaaagcagctttagaagcaacattagaagcagtatctgaaagcttaaaagcaggcgat
accgttcaattaatcggttttggtacattcaaagtaaatgagcgtgctgctcgtactggt
cgtaacccacgtactggtgaagaaatcaaaattgcagctgcaaaaatcccagcattcgtt
gcaggtaaagcattaaaagatttagtaaaataa

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