Anaerococcus prevotii: Apre_0446
Help
Entry
Apre_0446 CDS
T00964
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
apr
Anaerococcus prevotii
Pathway
apr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Apre_0446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apr03021
]
Apre_0446
03400 DNA repair and recombination proteins [BR:
apr03400
]
Apre_0446
Enzymes [BR:
apr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Apre_0446
Transcription machinery [BR:
apr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Apre_0446
DNA repair and recombination proteins [BR:
apr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Apre_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF3322
Motif
Other DBs
NCBI-ProteinID:
ACV28493
UniProt:
C7RG82
LinkDB
All DBs
Position
503316..507023
Genome browser
AA seq
1235 aa
AA seq
DB search
MAQFHEQMYGRTKRKSFSKFPQVLDLPNLLKVQKDSYEWFLKEGLGEILEDISPIEDYNG
NLILEFIGYEFDEETKYSVKESKYKDATYARDLKVKARLINKETEEVKEQEVFMGDFPMM
TDSATFVINGAERVIVSQLVRSPGVYYAEETDKSGDKMYSSTVIPNRGAWIEFDTDASHT
VNVRLDRTRKLPATTLVRALLFETDEEIINAIGDTKHLRNTLEKENSETADEALIEIYRK
LKPGDPASVESATNLINNLLFDDRRYDLAKVGRYKYNLKLALADRIEGLVSKDDVIDPET
GEVFVSAGEIIDEETAKAIENAGIVTVDVIKKDEYEEDKTLRVVGNNFVDFNSFEELKDV
DVTVDDFSEKVYFPVMKEIIEEANSPEEIKSLMERRKKELCPKHITKADILAIVNYQFNL
FEGIGYVDDIDHLGNRRVRGVGELLQNQFRVGLARMERVVRERMTTQDPDLATPQGLINI
KPVTAVIKEFFGSSQLSQFMDQTNPMSELTHKRRLSALGPGGLSRDRAGVEVRDVHDSHY
GRICPIETPEGPNIGLITSLTTYARVNKYGFIETPYRLVKEGGYVTDEIDYLTADIEDNF
IIAQANEPLDENDRFVNERVSGRGIKGENDIYPREKIQYMDVSPQQIVSVGASLIPFLEN
DDSTRALMGANMQRQAVPLIKTEAPIVATGIEHRAAKDSGVCVVSRSKGEVVYVGDDHIK
VKRASDGEIEDYELLKFERANQGTTINQRPIVKRGDKVEANEILADGPSTDNGELALGKN
ILIAFTTWEGYNFEDAMLLNEELVMDDVLTSVHIEEHECEARETKLGAEEITKDIPNVGE
DMKKDLDENGIIRIGAEVKSGDILVGKVSPKGETELSPEERLLRAIFGEKAREVRDTSLK
VPHGESGIVVDVKEYNKKDGDELAPGVNKVIRVYVAAKRKIMVGDKMCGRHGNKGVVSRI
LPREDMPFLPDGTPLQICLNPLGIPSRMNLGQVLEVHMGLAARTMGWKIATPVFDGALDT
EIEEVLEEAKKTAPYVNKTGKITLRDGRTGLPFQNPVTVGVMYMLKLHHMVEEKIHARSI
GPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASHTLQEILTVKSDDVTGRVKTYESI
VKGENIPEPGTPESFKVLVKELQSLALDVELLDEEGEVIELKENIDEQDRFSQVDKIDAS
KVKSLTRALNKDPETKTKVTSKAKSEDSDDENIEE
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggcccaattccatgaacaaatgtatggaagaactaagagaaagagtttttccaaattt
cctcaagtattagatttaccaaatttattgaaagttcaaaaagattcttacgaatggttc
cttaaggaaggtttgggagaaatcctagaagatatttctccaattgaagactataatggc
aacctaattctagaatttatcggttatgaatttgatgaagaaacaaaatattcagtaaaa
gaatccaaatacaaggatgcgacctacgcaagagatttaaaggttaaggcaagacttata
aataaggaaacagaagaagttaaagagcaagaagtctttatgggagacttcccaatgatg
acagattctgctacctttgttataaatggtgccgaaagagttatagtaagccagttagtt
agatctcctggtgtttattatgcagaagaaactgacaagagtggggataagatgtattct
tcaactgtcatccctaaccgtggtgcgtggattgagtttgatacagatgcaagccacaca
gtaaatgttagacttgatagaacaagaaaactacctgcaacaactctcgttcgtgcgctt
ttattcgaaacagacgaagaaatcatcaacgctatcggagataccaaacatttgagaaat
accctagagaaggaaaactcagagactgcagatgaagctttgatagaaatttatagaaaa
ttaaaaccaggggaccctgcaagtgttgaatctgcaacaaacttaatcaacaatctcctc
ttcgatgatagaagatacgaccttgctaaggttggtagatacaaatacaaccttaagctt
gccctagcagacagaatcgaaggacttgtatctaaggatgatgttatagatccagaaact
ggagaagttttcgtatcagcaggagaaattatcgacgaagaaacagccaaagctatagaa
aatgctggtattgttacagttgatgtaataaaaaaagacgaatacgaagaagataagacc
cttagggtagttggaaataactttgtagactttaactcatttgaagagctaaaagatgtc
gatgttacagttgatgacttcagtgaaaaagtatacttcccagttatgaaagagataatc
gaagaggcaaatagcccagaagaaatcaaatctctaatggagagaaggaagaaagagctt
tgcccaaaacacatcactaaggctgatatactcgctatagttaactaccaattcaacctc
tttgaaggaattggctatgtagacgatatcgaccacttaggtaatagacgtgttagagga
gttggagaacttctacaaaaccaatttagagtagggcttgctagaatggaaagagttgtt
cgtgaaagaatgacaacccaagatcctgaccttgcaactccacaaggcttaatcaatatc
aagccagtaacagctgtaatcaaagaattctttggttcatcccaactttcccaattcatg
gaccaaaccaacccaatgagtgagctaactcataagagaagattatctgctcttggacca
ggtggtttgtcaagagatagagctggtgttgaggtccgtgacgtgcacgattctcactac
ggaagaatctgtccaatagagactccagaaggaccaaatatcggactaatcacttccctt
acaacatacgcaagagtaaacaaatatggatttatagaaactccttacagacttgttaag
gaaggtggttatgtaactgatgagattgactacctaacagcagacatagaagataacttt
atcatagcccaagccaacgagccacttgatgaaaatgatagattcgtaaacgaaagagta
tcaggacgtggtattaagggtgagaatgatatctacccaagagagaaaatccaatacatg
gacgtttctcctcaacagatcgtatctgttggagcaagcctcataccattccttgaaaac
gacgactcaacccgtgccctcatgggtgccaacatgcaacgtcaggcagttccacttatt
aagacagaagctccaatagttgcgacaggtatcgagcacagagcagctaaggattcaggt
gtttgtgttgtatctaggtcaaagggtgaagttgtttatgtcggagatgatcacatcaag
gtcaaaagggctagcgatggagaaatcgaagactacgagttactcaaatttgaaagagcc
aaccaaggaacaaccatcaaccaaagaccaattgttaaaagaggagataaggttgaggct
aacgaaatccttgcagatggaccatctacagacaatggagagctagccctaggtaaaaat
atcctcatagcctttacaacatgggaaggatacaacttcgaggatgctatgcttcttaat
gaagagcttgtaatggacgatgtccttacctcagttcacatagaagagcatgagtgtgaa
gcgagagaaactaagcttggagcagaagagatcaccaaggatataccaaatgtcggcgaa
gatatgaaaaaagatctcgacgaaaatggtattatcagaatcggtgcagaagttaaaagc
ggagatatccttgtaggtaaggtatcaccaaagggagagactgaactatctccagaagaa
agacttctacgtgcaatcttcggtgaaaaagcaagagaggtacgtgatacttcccttaag
gttccacacggtgaaagcggaatagtagttgatgtcaaagaatacaacaagaaagatgga
gacgaacttgctccaggtgtaaacaaggtaataagagtatatgtcgctgccaaaagaaag
atcatggtgggagataagatgtgcggtcgtcatggtaacaagggtgtcgtttcaaggatt
cttccaagagaagatatgccattcttaccagacggaacacctctacaaatctgcctaaac
ccacttggtatcccaagccgtatgaaccttggacaggtacttgaagtccacatgggtctt
gcagcaagaacaatgggctggaagattgctacaccagtatttgatggtgcacttgataca
gaaatcgaagaagtcctagaagaagctaaaaagacagctccatatgtaaataagacagga
aaaataactcttcgtgatggtagaactggtcttccattccaaaacccagtaacagttgga
gtaatgtatatgcttaagctccaccacatggtagaagagaaaatccacgcaagatctatt
ggaccttactcactagtaacccaacaacctcttggtggtaaggcacaattcggtggacaa
agattcggagagatggaagtttgggccctagaagcctacggtgcaagccacaccctccaa
gaaatcctaacagttaagtcagatgacgttaccggaagagttaagacctatgaatcaatc
gttaagggagaaaatattcctgaaccaggtacaccagaatccttcaaggttcttgtaaag
gaacttcaatcccttgccctcgacgtagagctactcgatgaagaaggcgaagtaatcgaa
cttaaggagaatatcgacgaacaagatagattttctcaagtagataagatcgatgcttct
aaggttaagagtctaactagagccctaaacaaggacccagagacaaagactaaggttaca
agcaaggcaaaaagcgaagatagtgacgatgagaatatagaagaatag
DBGET
integrated database retrieval system
