Ancylobacter pratisalsi: G3A50_01080
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Entry
G3A50_01080 CDS
T06476
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apra
Ancylobacter pratisalsi
Pathway
apra03410
Base excision repair
apra03430
Mismatch repair
apra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3A50_01080 (recJ)
03430 Mismatch repair
G3A50_01080 (recJ)
03440 Homologous recombination
G3A50_01080 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apra03400
]
G3A50_01080 (recJ)
DNA repair and recombination proteins [BR:
apra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G3A50_01080 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G3A50_01080 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G3A50_01080 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QIB32449
UniProt:
A0A6P1YGN8
LinkDB
All DBs
Position
complement(210086..211906)
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AA seq
606 aa
AA seq
DB search
MSLVQPTAAPAPRPFLGIAHSASGRFWRERIDGRGAQTTLAMVQRYSLPEILARVLVGRG
VEIEEAQAWLDPTVKRLLPDPDSLTDMGAAVTRLADAVTAGEAVAVFGDYDVDGATSTAL
LVEVLRAAGLDPAFHIPDRIFEGYGPNIPAIEALAEKGAKLLVTVDCGTMSFEPFARARE
LGLDVVVIDHHQAGEALPEVVALVNPNRADDLSGLGHLCAVGVVFVVAVGLLRELRHRGW
WSSARPAPDLLEALDIVALGTVADVVPLVGLNRAFVTKGLLQLRKRRRPGLTALMDVARL
TGPPKAWHLGFLLGPRINAGGRIGDAALGTKLLLSADPIEAQVIATELDRLNTERQLMER
AIVAQAEMEAEAALGHQGATPVILASGQGWHPGVVGLVAARLKEKFGRPAFAVAFTGTHG
AGSARSIPGVDVGKAVRGAVDRGLLVKGGGHAMAAGLTVERERLGELRAYLEEVLAEAVD
GARAVDETLIDGALSAAGATPDLIELIEKAGPFGAGNPQPVFVFPAHRVVYAEAGNGDHV
RVRLRSSDGTVLSAIAFRAATTPLGQALLAARGKQLHVAGMLELDTWQGRAQPSLRISDV
ASLDNP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgttcaacctacagccgcgcccgccccgcggccctttcttggtatcgcccat
tcggccagtggccgtttctggcgcgaacgcattgacgggcggggagcccagacgacgctg
gccatggttcagcgctacagtctgcccgaaattctcgcccgcgtgcttgtcggtcggggg
gtggagatcgaggaggcgcaagcctggcttgatcccacggtgaagcggctgctgcccgat
cccgattcgctgaccgatatgggggctgccgtcacccggctcgccgatgcggtcacagcg
ggagaagcggttgccgtcttcggggactacgacgtcgacggcgcgacctcgactgcgctg
ctggtcgaggtgctgcgggccgccggcctcgaccccgccttccacattcccgaccgcatc
ttcgaggggtacggtccgaatattcccgctatcgaggcgctggcggagaagggcgcgaag
ctgctcgtcacggtcgattgcggcacgatgagtttcgagccttttgcccgagcccgcgag
cttggcctcgacgtggttgtgatcgaccaccaccaggccggcgaagcgctgccggaggtg
gtcgcgctggtgaaccccaatcgcgccgacgatttgtccggccttggccatctgtgcgcg
gtcggtgtggtcttcgtcgtcgcggtcgggctgttacgcgagcttcgtcaccgtgggtgg
tggagtagcgcccgccccgcgccggatctgctcgaagcgctggacatcgtggcgcttggc
acggtggcagacgtggttccgctcgtcggcctcaacagggctttcgtcaccaaggggctg
ctgcagcttcgcaagcgccgacggccggggctgaccgcccttatggatgtggcccgcctc
accgggccgccaaaggcgtggcacctcggctttctgctcggtccccgcatcaatgccggc
ggacgtattggcgacgccgcgctgggaaccaagctgctgctcagcgctgatccgatcgag
gcgcaggtgatcgcgacggagctggatcgtctcaataccgaacgtcagctcatggagcgc
gcgatcgtcgcccaggctgaaatggaggcggaggcggcactggggcatcaaggggccacg
ccggtgattctggccagcgggcagggctggcatccgggcgtcgtgggccttgtcgccgcc
cgcctgaaggagaagttcggccgcccggccttcgccgtcgcgtttaccggcacgcacggg
gctgggtcggcccgttccattcccggtgtcgatgtcggcaaggctgttcgcggggcggtc
gatcgcgggctgctggtgaagggcggcgggcatgcgatggcggccgggctgacggtggag
cgtgagcgcctcggcgaattgcgcgcctatctggaagaggtgcttgccgaggcggtggat
ggtgccagggccgtcgacgagacactgatcgacggcgccctttccgcggctggcgccacg
cctgatctcattgagctgatcgagaaggcgggccccttcggggcgggcaatccccagccg
gtcttcgtgtttcccgcgcaccgggtggtctatgccgaggccggcaatggcgaccatgtg
cgggtacgcctgcgcagctcggacggaacggttctctcggccatcgccttccgcgccgcg
acgacgccgctggggcaggcgctcctcgccgcgcggggaaagcagcttcatgtggccggg
atgctggaactcgacacctggcaggggagggcgcaacccagcctgcgcatcagtgatgtg
gcttcgctggataacccatga
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integrated database retrieval system
