Auxenochlorella protothecoides: F751_2377
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Entry
F751_2377 CDS
T04132
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03020
RNA polymerase
apro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F751_2377
09124 Replication and repair
03420 Nucleotide excision repair
F751_2377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apro03021
]
F751_2377
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_2377
03400 DNA repair and recombination proteins [BR:
apro03400
]
F751_2377
Transcription machinery [BR:
apro03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
F751_2377
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
F751_2377
DNA repair and recombination proteins [BR:
apro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
F751_2377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Tugs
Motif
Other DBs
NCBI-GeneID:
23613768
NCBI-ProteinID:
XP_011397548
UniProt:
A0A087SG06
LinkDB
All DBs
Position
Unknown
AA seq
173 aa
AA seq
DB search
MFYLLELNRELEVQPRHFGPKLAQEVEKRLRQEVEGTCSGIYGFVLAVLNLESLGKARIR
EGAGSAVFNVTYKCITFKPHKGEVLDVVVTTVNKMGFFAEAGPLQVFVSNHLIPEAFEFS
SIHEPCYATPDGEQRIAAASDVRLRIVGTRIDANEIFAVGDIKGDYLGVLQMT
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgttctacctgctggagttgaaccgggagctggaggttcagccgcggcattttgggcca
aaactagcgcaagaagtagagaaacgcctcagacaggaggttgagggtacctgcagcggc
atatatggctttgtgttggcagtactgaacctggagagcctgggaaaggcccgaatccgc
gagggtgctggatcggcggtgttcaatgtcacctacaagtgcatcacctttaagccacac
aagggggaggtgctggacgtggtagtgaccacagtgaacaagatgggcttctttgcggag
gcgggaccgcttcaggtcttcgtgtccaaccatttgatcccggaggcttttgagttctcc
agcatacacgagccgtgctacgccaccccggatggggagcagaggatagccgccgcctcc
gatgtgcggttgaggatcgtgggcacccgcatcgatgccaacgagatttttgcggtggga
gacatcaagggcgactacctgggagtactacaaatgacctga
DBGET
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