Candidatus Azobacteroides pseudotrichonymphae: CFPG_665
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Entry
CFPG_665 CDS
T00792
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aps
Candidatus Azobacteroides pseudotrichonymphae
Pathway
aps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFPG_665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aps03019
]
CFPG_665
Enzymes [BR:
aps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CFPG_665
Messenger RNA biogenesis [BR:
aps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFPG_665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
MIOX
AbiEii
Motif
Other DBs
NCBI-ProteinID:
BAG83928
UniProt:
B6YRV6
LinkDB
All DBs
Position
complement(965070..966494)
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AA seq
474 aa
AA seq
DB search
MSSIQISREKLQTNPIFRVLTSTSDTLGVDAYVIGGFVRDIFLHRLSKDIDVVCVGNGIS
LAKEVAKSLGSASLILFKNYGTAQLKYRDIAIEFVGARKESYSWAFRNPIVEEGSLEDDI
KRRDFTINTLAICINQNRFGELIDIFDGLTDLEECSIRTPLDPDITFSDDPLRMLRAIRF
ASQLGFFIESKTFESIGNNCNRINIVSRERIVDELNKIILSPRPSVGFELLEKTGLLRLI
LPELTALKGIETREGIGHKDNFNHTLAVVDNLAKVSNKLWLRWAALLHDIGKPLVKRFNY
RCGWTFHGHECKGAEMLKKIFRRMRMPINNNLQYVEKLVFLHMRPIVLSDNEVTDSAIRR
LLFEASDDIDDLMMLCEADITSKNLGKVKQFLYNFKLVRNKLKSIEEKDRVRNFQPPIDG
VEIMKMFSLPASKKIGELKLALKEAILDGEIPNEYEAAHNYLINLAKQRGIVED
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcattcaaatttcaagggaaaaacttcaaaccaatcctatttttagagttttg
acttctacttccgatactttgggagtggatgcatatgttatcggtgggtttgttcgtgat
atatttcttcatcgtttatctaaagatattgatgttgtttgcgtaggtaacggaatttct
ttagcgaaagaagttgctaagagtttagggtcagccagtcttattcttttcaagaattat
ggtacagctcaattaaaatatagggatatagcaatagaatttgtgggggcaagaaaagaa
tcttacagttgggcttttcgtaatcctatagtggaagaaggatctttggaagacgatata
aagcgtagggactttacgattaatacattagcaatatgtattaatcaaaatcgttttgga
gagttgatagacatttttgatggattgactgatttggaagaatgttctattagaacaccc
cttgatccagatattactttttcagatgatcctttacgaatgttgcgagcaattcgcttt
gcttcgcaattaggtttttttatagaatcaaagacttttgaatctataggaaataattgt
aacaggataaatattgtttcaagagaacgcatagtggatgaattgaacaaaattattctt
tctcctcgcccttcggtgggttttgaacttttggagaaaactggtttattacgtctcatt
cttcccgagcttacagctctcaaagggatagagactagagaaggtattggtcataaggat
aattttaatcatactttagctgttgttgataaccttgctaaagtgagtaataagttatgg
ttacgttgggcagctttgctccatgatattggtaaaccccttgttaaacgatttaattat
agatgcgggtggacttttcatgggcatgagtgtaaaggagcagaaatgttgaaaaaaatt
tttaggcgtatgcgaatgccaatcaataataatcttcaatacgtggaaaagctagttttt
ctacatatgcgtcctattgtattgtcagataacgaggtaacggactcggctattcgtcgt
ttgttatttgaagcaagcgatgacattgatgatttgatgatgctttgtgaagctgatatt
acttctaaaaacttgggaaaggtaaaacaatttctttataacttcaagctggtacgaaat
aagttgaagagtatagaggaaaaggatagggtgagaaattttcaacctccaatagatgga
gtggagattatgaaaatgttttctttgcctgcaagtaaaaaaataggagagttaaaattg
gcactcaaggaggctatattggatggagagattccaaatgaatatgaagctgctcataat
tatttaatcaatttagcaaaacagagaggaattgtagaggattaa
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