KEGG   Lancefieldella parvula: Apar_1111
Entry
Apar_1111         CDS       T00983                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
apv  Lancefieldella parvula
Pathway
apv03030  DNA replication
apv03410  Base excision repair
apv03420  Nucleotide excision repair
apv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Apar_1111
   03410 Base excision repair
    Apar_1111
   03420 Nucleotide excision repair
    Apar_1111
   03430 Mismatch repair
    Apar_1111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apv03032]
    Apar_1111
   03400 DNA repair and recombination proteins [BR:apv03400]
    Apar_1111
Enzymes [BR:apv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Apar_1111
DNA replication proteins [BR:apv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Apar_1111
DNA repair and recombination proteins [BR:apv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Apar_1111
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Apar_1111
   MMR (mismatch excision repair)
    DNA ligase
     Apar_1111
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Apar_1111
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH RNA_ligase HHH_8 5_3_exonuc UPF0758_N
Other DBs
NCBI-ProteinID: ACV51539
UniProt: C8W7U8
LinkDB
Position
complement(1255728..1257845)
AA seq 705 aa
MAALSPKETARAAELNRILNHAAYAYYALDNPELTDAEFDRLLIELQQLEAAYPELITED
SYTQRVGGYVSEQFEPVQHAARMYSMDDAMNLEELDAWLSRTDEALGASPTNPVAYTCEL
KIDGLGVALTYRDGQFVRAATRGDGSTGENVTANVLTISDVPRELALAGLERVENRGLNQ
SIEVRGEVYMPKHSFIRLNEDADAAGKQPFANPRNAAAGSLRQKDPKITAHRDLETFIYA
VADEGPLDVHSQWEFLNWLRSCGFNVNPHARRCLNAQEVHDFCAQALEQRGDLNYDIDGV
VVKVDSFASQEALGFTSRAPRWAIAFKFPPEEKQTVLREIRIQVGRTGVLTPVAEFDPVT
VAGSTIARATLHNLDEIRRKNVREGDTIIVHKAGDVIPEVVGPVLNLRPADAVEFQMPAT
CPSCGSPVIQEEGEVAFRCVSIDCPAQAVERLIHWGSRKAMDIDGLGDELINRMVEEGVL
SDVADFYDKLTEEMLACMPTGRVYDTDTADHLSGDSIPVGHTIAKKVMAKVEESKTRGLG
RVLFGIGMRHVGANVAELLAQEFGSIQALATAPVEKIAEIPGIGPKIAESVHEFFSIPEN
VAVIERLRQAGVVLEEEKTENELPQTLAGLTFVLTGTLEHFTRDEAGAQLKAMGAKVSGS
VSKKTSFVVAGEAAGSKLTKAESLGVPVLDETALQQILETGQAPA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggcagcactttcgccaaaagagaccgctcgtgcagcagagctcaataggatcttgaat
catgcggcatatgcttattatgcccttgataatcctgagctgactgacgctgaatttgat
cgtctccttattgagcttcaacagcttgaggcagcctatccagagcttattactgaggat
agctatacgcagcgcgtaggcggttatgtttctgagcagtttgagcctgttcagcatgct
gctcgtatgtattccatggatgacgctatgaatctggaagagctggatgcatggctttct
agaaccgatgaagctctgggtgcttcaccaactaatcctgtggcatatacctgtgagctt
aagattgatggtttgggtgtcgcactgacctatcgtgatggtcagtttgtacgcgctgct
acgcgaggtgacggaagtactggagaaaacgttacggcaaacgttttgactatctccgat
gttccacgagagcttgcgcttgctggtcttgagcgggttgagaatagaggtcttaaccag
agcattgaagtacgtggtgaggtttatatgccaaagcattctttcattcgtttgaatgag
gatgcggacgctgctggtaaacagccttttgccaatccaagaaatgctgctgctggatct
ttgcgccagaaggatccaaagattaccgctcatcgagaccttgagacttttatctatgca
gtagctgatgagggtcctcttgatgttcacagtcagtgggagtttttgaattggcttcgt
agttgtggttttaatgttaaccctcatgctcgtcgatgtcttaatgctcaggaggttcat
gatttctgcgctcaagctcttgagcagcgaggagatcttaactacgacattgatggcgtg
gtagtaaaggttgattcatttgccagccaagaggctctaggatttacttctcgcgctcct
cgttgggctattgcatttaaatttccaccagaggaaaagcagactgttttgcgagaaatt
cgtattcaggttggtcgtactggtgtacttacacctgttgccgagtttgatcctgtcact
gttgcaggttctaccattgcccgtgcaacccttcataatcttgacgaaattcgccgcaag
aatgtgcgcgagggcgataccattattgtccacaaggcgggagatgtcattccagaggtt
gtaggaccagttttaaatcttcgacctgcagatgctgttgagttccagatgccagctacc
tgcccaagctgtggtagccccgttattcaagaagagggagaggtggccttccgctgcgtc
tctatcgattgccctgctcaagcagttgagcgtttgattcactggggaagtcgaaaggct
atggacattgacggccttggtgatgagcttattaaccgtatggttgaagagggcgttctt
tctgacgtagctgacttttatgacaagcttactgaagagatgctggcatgtatgcctaca
ggtcgcgtctatgataccgatactgcagatcacctttctggcgatagtattcctgtgggt
cacactattgctaagaaggttatggcaaaggttgaggaatcaaagacgcgaggtcttgga
cgcgtactctttggtattggtatgaggcacgttggtgctaacgtcgcagagcttcttgct
caggagtttggctctatccaggcgcttgctacagctcctgtcgagaaaatcgctgaaatc
ccaggtattggtcctaagattgcagagtctgtacacgagttcttttcgattccagaaaat
gttgccgttattgagcgtcttcgtcaggcgggtgtagtgcttgaggaagagaaaacagaa
aacgagcttcctcagacgcttgctgggcttacttttgttttaacgggaactcttgagcac
tttacccgcgatgaagctggtgctcagcttaaagctatgggagcaaaagtttctggctct
gtatctaagaagacaagctttgtagtagcaggagaagccgcgggatctaagcttacaaag
gctgaaagcttgggtgttcccgtacttgatgagacggcacttcagcaaattcttgaaaca
ggccaagcacctgcttaa

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