Acetobacter pasteurianus IFO 3283-01-42C: APA42C_24350
Help
Entry
APA42C_24350 CDS
T01818
Name
(GenBank) polyribonucleotide nucleotidyltransferase RNA binding S1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Pathway
apw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APA42C_24350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apw03019
]
APA42C_24350
03016 Transfer RNA biogenesis [BR:
apw03016
]
APA42C_24350
Enzymes [BR:
apw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
APA42C_24350
Messenger RNA biogenesis [BR:
apw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
APA42C_24350
Transfer RNA biogenesis [BR:
apw03016
]
Prokaryotic type
tRNA degradation factors
APA42C_24350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
CCDC47
Motif
Other DBs
NCBI-ProteinID:
BAI18762
LinkDB
All DBs
Position
complement(2543263..2545413)
Genome browser
AA seq
716 aa
AA seq
DB search
MFNYFRKEIEWGGRPLILETGKVARQADGAVMVTYGETVVLCTAVGAKDVKPGQDFFPLT
VNYQEKAYAAGKIPGGFFKREGRPSENETLVSRLIDRPLRPLFPEGFRNEVQVIATVLTH
DMENDPSIPALIGCSAALTLSGIPFFGPVGAARVGFKDGAFILNPTQEQIKESDLELVVA
GTAEGVLMVESEASELSEEVMLDAVTFGHTAFQPVLDAIISLAEHAAKEPWALAEPTKEE
IQLRKQVEKAGRKLIADAYKEKQKQVRYEKLKAAREAIIEKLTADELDVAAAKPMIKDLE
ADVVRSSVLKTGKRIDGRDLVTVRPIVPEVGILPRVHGSSLFTRGETQALVVTTLGTGQD
EQVIDALEGEYRTNFMLHYNFPPFSVGECGRIGSPGRREIGHGKLAWRAIHPLMPSRKEF
PYTVRVVSEITESNGSSSMATVCGGSLALMDAGVPLKRPVAGIAMGLIKEGDDFAVLSDI
LGDEDHLGDMDFKVAGTEQGVTALQMDIKITSITPEIMKIALGQARDGRMHILGEMSKAL
TETRTNVSSTAPKITTMKVPREKIRDVIGSGGKVIREIVEYSGAKVDIGDDGTITIAAAS
DDQAQKAIDRINGIVAEPELGRIYDGKVVKTADFGAFVNFLGARDGLVHISELAQGRVGK
TTDVVKEGDTVKVKVIGFDDRGKVKLSMRVVDQNTGADITETVGEKPSRGPRRDAE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactacttccgtaaagagattgaatggggcggtcgcccgctgattctggaaacc
ggtaaggttgcccgtcaggctgatggcgccgttatggttacctacggtgaaaccgttgta
ttgtgcactgcagttggcgcaaaagacgtaaagccgggtcaggacttcttcccgctgacg
gttaactatcaggaaaaagcttacgctgctggtaagattcctggtggtttcttcaagcgc
gaaggccgtccttctgaaaatgaaaccctagtttcccgcctgattgatcgcccgctgcgt
ccgctgttccccgaagggttccgcaacgaagtgcaggtgattgcaaccgtgctgacgcac
gatatggaaaatgatccttccattcctgcgctgattggctgctctgccgctcttaccctg
tctggtattccgttctttggccccgttggcgctgcccgcgttggctttaaggatggcgca
ttcatcctgaaccccacacaggaacagatcaaagaatcagatctggaactggttgtggct
ggcacggctgaaggcgtgctgatggtggaatctgaagcttctgaactgtctgaagaagtg
atgctggatgccgtaacattcggccatacagcgttccagccggttctggatgccattatc
tctctggcagaacacgccgccaaggaaccttgggcactggcagagccgaccaaggaagaa
attcagctgcgcaagcaggttgaaaaagcaggccgcaagctgattgctgatgcttataag
gaaaagcagaagcaggttcgctacgaaaagctgaaagctgcgcgtgaagcgattattgaa
aagctgacggctgatgaactggacgttgcagccgccaagccgatgattaaggatctggaa
gctgacgtggtacggtcttccgttctgaaaaccggcaagcgtattgatggtcgtgatttg
gtaaccgttcgcccgatcgtgccggaagtgggcattctgccgcgcgtgcatggttcttct
ctgttcacccgtggtgaaacacaggcactggttgtaaccacgctgggcactgggcaggac
gaacaggttattgatgcgctggaaggtgaataccgcaccaactttatgctgcattataac
ttccctcctttctctgtgggtgaatgtgggcgtatcggttctccgggccgtcgtgaaatc
gggcatggcaagctggcatggcgcgccattcacccgctgatgccttcccgtaaggaattc
ccgtacacagtgcgcgtggtttccgaaattacggaaagcaacggctcttcctccatggca
accgtatgtggcggctctctggctctgatggatgctggcgtgccgttgaagcgtccggtg
gctggtatcgccatgggcctgatcaaggaaggcgatgatttcgctgttctgtccgatatc
cttggcgatgaagatcaccttggggatatggatttcaaggtggccggcaccgagcagggt
gtaaccgctctgcagatggatattaagattacctccatcacgccggaaatcatgaagatt
gctctgggtcaggcacgtgatggccggatgcacattctgggtgaaatgagcaaggcgctg
acagaaacacgcacgaacgtgtcttccacagcaccgaagatcaccaccatgaaggtgccc
cgggaaaagattcgtgatgtgatcggttctggcggtaaagtgatccgcgaaatcgtagaa
tattctggcgccaaggttgatattggggatgacggcacaatcaccattgccgcagcttct
gatgatcaggcacagaaggccattgatcggatcaacggcattgtagcggaaccggaactg
ggccgcatttacgatggtaaggttgttaaaaccgccgactttggcgcgtttgtaaacttc
cttggtgcgcgtgatggcttggtgcacatttccgaactggcgcagggtcgcgttggtaaa
accacagacgtggtgaaggaaggcgataccgtgaaagttaaggtcatcggctttgatgat
cgcggtaaggttaagctgtccatgcgtgttgttgatcagaacacgggtgcggatatcacg
gaaactgtgggtgaaaagccctcacgtggcccccgtcgggatgctgaataa
DBGET
integrated database retrieval system
