Aquimarina sp. AD1: D1815_06020
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Entry
D1815_06020 CDS
T05625
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aqa
Aquimarina sp. AD1
Pathway
aqa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1815_06020 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqa03019
]
D1815_06020 (recQ)
03400 DNA repair and recombination proteins [BR:
aqa03400
]
D1815_06020 (recQ)
Enzymes [BR:
aqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1815_06020 (recQ)
Messenger RNA biogenesis [BR:
aqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1815_06020 (recQ)
DNA repair and recombination proteins [BR:
aqa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1815_06020 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HTH_40
RQC
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
HTH_7
zf-CXXC
HTH_38
RPA_C
GerE
TnsD
Motif
Other DBs
NCBI-ProteinID:
AXT58634
UniProt:
A0A3A9WMW5
LinkDB
All DBs
Position
1329767..1331881
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AA seq
704 aa
AA seq
DB search
MPDQKQILSTLKEYFGYDSFRPLQEDIVNSIFNGHDNIVIMPTGGGKSICYQLPALLLSG
ITLVISPLIALMKDQVDGLKSNGIEAAFVNSSQNENEQQEIYQKILNQEIKLLYVAPESL
NFLDSLLSQIEIGLIAIDEAHCISSWGHDFRPAYTQLGYLKSRFPNTPLIALTATADKAT
RQDICQQLNIKNAKQFLASFDRKNLSLEVRPGNKRIEQILNFLEDKPNDSGIIYCLSRKT
TEMLAEKLQNQGFIAEAYHAGIPHEKRANVQEGFINDNIQIVCATIAFGMGIDKSNVRWV
IHYNLPKNIEGYYQEIGRAGRDGLPSATLLFHSYADVVQLQKFATTSGNQEVQMAKLDRM
KQYADSLSCRRKILLSYFGELIEEDCGNCDVCNNPPSFIDGTIIAQKALSTVARIKEEEP
IGTIIDVLRGAQNALVLDKGYQQLKTYGIANDISWRDWQQYIIQLINQGYLEIAFHLNNK
LKLTELSKKVLFENEKVRLANLIELEKIKEKNVEQTKKVSSNTLFDKLRELRLSLAKEAG
IPAYQIFNDATLKEMEKVRPMSDDEFMRINGVGKMKMQNYGYQFIKTIIDFSTEKTKKKK
KSNKNKGNSHKETFNLYKQGLSIEEIAQERKLAQSTIFSHIMKLYNDGEDIDLKQFISNA
DIKSVKEAKETLDNPDGLKPYFEHFEQAMDYNSIKLALAILEND
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccagatcaaaaacaaattttaagcacgctaaaagaatattttgggtatgatagcttc
agaccattacaagaagacattgttaattctatatttaatggtcatgataatattgtaatc
atgcctactggtggtggaaaatctatctgctatcaacttcctgctttacttctttctggt
attacattagttatttctccattgattgctcttatgaaagatcaggtagatggactaaag
tctaatggaatcgaagctgcatttgtaaatagtagtcaaaacgaaaatgaacaacaagaa
atttatcaaaaaatccttaatcaggaaattaaactactttatgtagctccggagagtttg
aatttcttagattcgttattatcacaaatagaaataggtttaatcgcaatcgacgaagct
cattgcatctcctcctggggtcatgattttagaccagcatatacacaattaggatatcta
aaaagtcgattccctaacacacctttgattgcactaactgctacagcggataaagcaact
aggcaagatatttgtcaacaacttaatattaaaaatgccaaacaattcttagcttctttt
gatcgtaaaaatttaagtctcgaagttcgcccgggaaataaaagaattgagcagatactt
aattttctagaagacaagcctaacgattctggtattatctactgcttaagtagaaagact
acagaaatgttagcagaaaaactacagaatcaagggtttattgcagaggcatatcatgct
ggtattccacacgaaaaaagagccaatgtacaagaaggttttataaatgataatattcaa
attgtatgtgctaccattgcatttggaatgggaattgacaagtccaatgtacgctgggtt
attcattataatttacccaaaaacattgaaggatattatcaagaaattggtcgtgcagga
agagatggactaccatctgctacactactctttcatagttatgcagatgttgttcaatta
caaaaatttgcaactacctccgggaatcaagaagtccaaatggcaaaattagatagaatg
aagcaatatgcagattctctaagttgcagaaggaaaatattacttagttattttggagaa
ttaatagaagaggattgcggtaattgtgatgtatgtaataatcctcctagttttattgat
ggcactataattgctcagaaagctttatctaccgttgctagaattaaagaagaagaaccc
ataggaactataatcgatgtattaagaggtgcccagaatgcattagtactagataaagga
tatcagcaacttaaaacttacggtatcgcgaatgatatttcttggcgagattggcaacaa
tatatcattcaattaataaatcaaggatatttagaaattgcttttcacttaaacaacaaa
ttaaaacttactgaactttcaaaaaaagttctttttgaaaatgaaaaagtacgtcttgca
aatcttatcgaattagaaaaaattaaagaaaagaatgttgagcaaaccaagaaagtttca
tctaatacattatttgataaattacgtgaattacgtttaagtcttgctaaagaagctggt
attcctgcatatcaaatatttaatgatgcaaccttaaaagaaatggaaaaagtaagaccg
atgagtgatgatgagtttatgcgaataaatggagttgggaaaatgaaaatgcaaaactat
ggatatcaattcattaaaacgatcattgacttttctacagaaaaaacaaagaagaagaaa
aaatcaaataagaataaaggcaactctcataaagaaacctttaatttatataaacaaggg
ttgtccatagaagaaatcgctcaagaaagaaaactagcacaatcaactattttttctcat
atcatgaagctgtataatgatggagaagacattgatttaaagcaatttattagtaacgct
gatattaaatctgtaaaagaagccaaagaaacattggataatccggacgggttaaaacca
tattttgagcattttgaacaagcaatggattataactctatcaaactggcactagctatt
ctggaaaacgactaa
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