KEGG   Aquaspirillum sp. LM1: BXU06_17170
Entry
BXU06_17170       CDS       T04696                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
aql  Aquaspirillum sp. LM1
Pathway
aql03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aql00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BXU06_17170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aql03400]
    BXU06_17170
Enzymes [BR:aql01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BXU06_17170
DNA repair and recombination proteins [BR:aql03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BXU06_17170
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_25
Other DBs
NCBI-ProteinID: AQR66591
UniProt: A0A1U9JR70
LinkDB
Position
3942070..3945780
AA seq 1236 aa
MSQPLDPLTLPLTGSWLIEASAGTGKTYTLAALYVRLVLGHDPDANPAQRLPPLSPGQIL
VMTFTEAAASELRERIRLRLTGLADWLRRDAPVDEADVFSQGLLASLDADGGLGREQAAI
RLALAADLLDDAAISTIHSWCLRMLREHALYSGNLFDETLDQDDGQRYHEAVRDYWRTFV
YPLSDAQFALLASHWPTPDALANTLRPLLGALPPSDWRGPQALGQALTRIARQLAELKQS
WPRQRVDELRQLLAGWQADKRYNGTRLRSGTVSKLLDALEAWASTPTQHDLDASLDWSRL
SPAFLAEIWKKTELPPVVPALEALAALPAQLEAIVPFAHGVLVHAGQWVGDNLARHKRRE
AVMDFDDLLTRLDAALHGPDGERLASAIRRQFPAALVDEFQDTDPLQYRMLNTLYPVAQP
LPGTLLAMIGDPKQAIYAFRGGDIFTYLNARRATAGRHVSLGSNFRSTTAMVAQVNQLFA
FAEQQHAAGAFAFADETGERLLPFEPVRAAGRSEVLLHRGQPLAALNVWLDTTAQGVGSY
REHMAERCADSLVALLAGGQAGDTGFAHADGRFAALCPADIAILVRDGSEARSVRQALAR
RGVRTVYLSDRDSVYASREAQDLLHWLRACAEPTQERLLRTALATATLDLPYARLDALND
AHTRDWDAEVERFVRLHGCWQREGILPMLRQLLQLFDLPARCLTREGGERTLTNLLHLAE
LLHAAAEQLDGEQALIRHLAEQMAQPERGGDERMVRLESDAGLVRVVTIHKSKGLEYPLV
CLPFAASYKPVDGSRLTAYRYHDPQPPYAARLSLFKRDDERTAQDRERLQEDLRLFYVAV
TRARHALWLGIAPLRRGNHKNNTLHESALGYLLTGGATLADADLTDACLRWLDAEHAGPA
RLAINPDLGHSPARLPADTDATALGEARTCQLTPTPPWRMSSYSALILRLEGSSAPLAES
GLDEAAQEIAEDIRPNLATPASAVGAARLGDLPTGPASGVFVHGLLEWMAQEGFATLAAQ
PARLRDRVARGCALRQWESLIEPLSRQLEAWLHTPLGLPGPAVTLAQLECYQPELEFWFA
AHQLPLARLDQQVQRMLLPGQPRPQLRTDRLNGMLKGFVDLVLCHEGRYYVVDYKTNFLG
PRLGDYGADALTAPLAEARYDLQAALYLLALHRHLRERLPDYDCARHLGGAVYLFLRGWD
GAGHGVWHACPDAAQIHALDALFAGQPLPGANHADL
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgagccagccacttgacccgttgaccctgccgctgaccggcagctggctgattgaagcc
agcgccggcaccggcaaaacctataccctggcggcgctgtacgtgcgcctggtgctgggc
cacgaccccgacgccaacccggcgcaacgcctgccaccgttgtcgcccggccagattctg
gtgatgaccttcaccgaggccgccgccagcgagctgcgcgaacgcatccgcctgcgcctg
accgggctggccgactggctgcgccgcgacgcaccggtggacgaggccgatgtattcagc
cagggcctgctggccagcctggatgccgatggcggcctgggccgcgagcaggcggccatc
cgcctggcgctggcggcggatttgctcgacgacgcggcgatttccaccatccacagctgg
tgcctgcgtatgctgcgcgaacacgcgctgtacagcggcaatctgtttgacgaaaccctg
gaccaggacgacggccagcgctaccacgaagcagtgcgcgactactggcgcacctttgtg
tatcccttgtccgatgcccagtttgccctgctggccagccactggccgacgccggacgcc
ttggccaacaccctgcgcccgctgctgggtgcgctgccgccgtccgactggcgcggcccg
caggcgctgggccaggcgctgacccgcattgcccgccaactggccgaactgaagcagtcc
tggccgcgccagcgggtggacgagctgcgccagctgcttgccggctggcaggcagacaaa
cgctataacggcacccgcctgcgcagcggtacggtaagcaagctgctcgacgcgctggag
gcctgggccagcacgccgacacaacacgatctggacgccagcctggattggagccggctg
tcgcccgcctttctggccgaaatctggaaaaaaactgagctgccgcctgtggtgccggca
ctggaggcgctggcggccctgcccgcccagctggaggccatcgtgccgtttgcccatggc
gtgctggtccatgccggccagtgggtaggcgacaacctggcccggcacaagcgccgtgaa
gcggtgatggactttgacgacctgctcacccggctggatgccgccctgcacggcccggat
ggcgagcggctggccagtgccatccgccggcagtttccggcggcgctggtggacgaattc
caggacaccgacccgctgcaataccgcatgctcaacaccctgtacccggtggcccagccg
ctgcctggcaccctgctggcgatgatcggcgacccgaaacaggcgatttacgcctttcgc
ggtggcgatatctttacctacctgaacgcccgccgcgccacggcgggccgccatgtcagc
ctgggcagcaatttccgttcgaccacagccatggtggcgcaggtcaaccagctgtttgcc
tttgccgaacagcagcatgccgccggggcgtttgcctttgccgatgaaactggcgagcgc
ctgctgcccttcgagccggtgcgcgccgcaggccgcagcgaggtgttgctgcatcgcggc
cagccgctggcggcgctgaatgtctggctggataccaccgcacagggggtgggcagctac
cgcgagcacatggccgagcgctgcgccgacagtctggtggcgctgctggccggtggccag
gccggcgacaccggctttgcccacgccgatggccgttttgccgcgctgtgtccggcggat
atcgccattctggtacgcgatggcagcgaggcgcgcagcgtgcgtcaggcgctggcccgg
cgcggcgtgcgcacggtgtatttgtccgaccgcgattcggtgtacgccagccgcgaagcc
caggacctgctgcactggctgcgcgcctgcgctgaacccacccaggagcgcctgctgcgc
acggcgctggccaccgccacgctggatttgccctacgcccggctggatgcgctcaacgac
gcgcacacccgcgactgggatgccgaagtggagcgctttgtccggctgcatggctgctgg
cagcgcgaaggcatcctgcccatgctgcgccagctgttgcagctgtttgacctgccggcc
cgctgcctgacgcgcgaaggcggcgaacgcacgctgaccaacctgctgcacctggccgag
ctgctgcatgccgccgccgagcagctggacggcgaacaggcgttgattcggcatctggcc
gagcagatggcccagcccgagcgtggcggcgacgagcgcatggtgcggctggaaagcgac
gctggtctggtgcgggtggtgaccatccacaaatccaaggggctggaatacccgctggtg
tgcctgccgtttgccgccagctacaagccggtggatggcagccggctgaccgcctaccgc
taccacgacccacaaccgccgtatgccgcccggctgtcgctgttcaaacgcgacgacgag
cgcaccgcgcaagaccgcgaacgcctgcaggaagacctgcgcctgttttatgtggcggtc
acccgcgcccgccacgcgctgtggctgggcattgcgccgctgcgtcggggcaatcataaa
aacaacaccctgcatgaaagcgcgctgggctatctgctgaccggcggtgccacgctggcc
gacgccgacctgactgacgcctgcctgcgctggctggatgctgaacacgccggcccggcc
cggctggcgatcaaccccgacctgggccacagcccggcgcggctgcctgccgacaccgac
gccaccgccctgggcgaggcccggacctgccagctgacccccacgccgccctggcggatg
agcagctatagcgcgctgattctgcgtctggagggcagcagcgcgccgctggcggaatcc
ggcctggatgaagccgcgcaggaaattgccgaagatatccggcccaatctggccacgccg
gccagtgcggtgggcgcggcaaggttgggcgatctgcccaccgggccggccagcggggta
tttgtgcatggcctgctggaatggatggcgcaggaaggctttgccacgctggccgcccag
ccggcccgcctgcgcgaccgggtggcacgcggctgcgccttgcgccagtgggaatcgctg
atcgagcctctctcccgccagctggaagcctggctgcacaccccgctgggcctgcccggc
ccagcggtgaccctggcgcagcttgaatgctatcaacccgaactggagttctggtttgcc
gcccaccagttacccctggcccggctcgaccagcaggtgcagcgcatgctgctgcccgga
cagccacgcccccagctgcgcaccgaccggctgaacggcatgctcaagggctttgtcgat
ctggtgctgtgccacgaaggccgctattacgtggtggactataaaaccaactttcttggg
ccgcgcctgggcgactatggtgctgacgcgctcactgccccgctggccgaagcgcgctac
gacctgcaggcagcgctttacctgctggcgctgcatcggcatttgcgcgaacgcctgccc
gattacgactgcgcccgccatctgggcggcgcggtgtatctgttcttgcgcggctgggat
ggcgcaggccatggcgtatggcacgcctgccccgacgccgcacagattcacgcgctggat
gcgctgtttgccggccagcccctgccaggagccaaccatgctgacctttga

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