Aquaspirillum sp. LM1: BXU06_17170
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Entry
BXU06_17170 CDS
T04696
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BXU06_17170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_17170
Enzymes [BR:
aql01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BXU06_17170
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BXU06_17170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AQR66591
UniProt:
A0A1U9JR70
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All DBs
Position
3942070..3945780
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AA seq
1236 aa
AA seq
DB search
MSQPLDPLTLPLTGSWLIEASAGTGKTYTLAALYVRLVLGHDPDANPAQRLPPLSPGQIL
VMTFTEAAASELRERIRLRLTGLADWLRRDAPVDEADVFSQGLLASLDADGGLGREQAAI
RLALAADLLDDAAISTIHSWCLRMLREHALYSGNLFDETLDQDDGQRYHEAVRDYWRTFV
YPLSDAQFALLASHWPTPDALANTLRPLLGALPPSDWRGPQALGQALTRIARQLAELKQS
WPRQRVDELRQLLAGWQADKRYNGTRLRSGTVSKLLDALEAWASTPTQHDLDASLDWSRL
SPAFLAEIWKKTELPPVVPALEALAALPAQLEAIVPFAHGVLVHAGQWVGDNLARHKRRE
AVMDFDDLLTRLDAALHGPDGERLASAIRRQFPAALVDEFQDTDPLQYRMLNTLYPVAQP
LPGTLLAMIGDPKQAIYAFRGGDIFTYLNARRATAGRHVSLGSNFRSTTAMVAQVNQLFA
FAEQQHAAGAFAFADETGERLLPFEPVRAAGRSEVLLHRGQPLAALNVWLDTTAQGVGSY
REHMAERCADSLVALLAGGQAGDTGFAHADGRFAALCPADIAILVRDGSEARSVRQALAR
RGVRTVYLSDRDSVYASREAQDLLHWLRACAEPTQERLLRTALATATLDLPYARLDALND
AHTRDWDAEVERFVRLHGCWQREGILPMLRQLLQLFDLPARCLTREGGERTLTNLLHLAE
LLHAAAEQLDGEQALIRHLAEQMAQPERGGDERMVRLESDAGLVRVVTIHKSKGLEYPLV
CLPFAASYKPVDGSRLTAYRYHDPQPPYAARLSLFKRDDERTAQDRERLQEDLRLFYVAV
TRARHALWLGIAPLRRGNHKNNTLHESALGYLLTGGATLADADLTDACLRWLDAEHAGPA
RLAINPDLGHSPARLPADTDATALGEARTCQLTPTPPWRMSSYSALILRLEGSSAPLAES
GLDEAAQEIAEDIRPNLATPASAVGAARLGDLPTGPASGVFVHGLLEWMAQEGFATLAAQ
PARLRDRVARGCALRQWESLIEPLSRQLEAWLHTPLGLPGPAVTLAQLECYQPELEFWFA
AHQLPLARLDQQVQRMLLPGQPRPQLRTDRLNGMLKGFVDLVLCHEGRYYVVDYKTNFLG
PRLGDYGADALTAPLAEARYDLQAALYLLALHRHLRERLPDYDCARHLGGAVYLFLRGWD
GAGHGVWHACPDAAQIHALDALFAGQPLPGANHADL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccacttgacccgttgaccctgccgctgaccggcagctggctgattgaagcc
agcgccggcaccggcaaaacctataccctggcggcgctgtacgtgcgcctggtgctgggc
cacgaccccgacgccaacccggcgcaacgcctgccaccgttgtcgcccggccagattctg
gtgatgaccttcaccgaggccgccgccagcgagctgcgcgaacgcatccgcctgcgcctg
accgggctggccgactggctgcgccgcgacgcaccggtggacgaggccgatgtattcagc
cagggcctgctggccagcctggatgccgatggcggcctgggccgcgagcaggcggccatc
cgcctggcgctggcggcggatttgctcgacgacgcggcgatttccaccatccacagctgg
tgcctgcgtatgctgcgcgaacacgcgctgtacagcggcaatctgtttgacgaaaccctg
gaccaggacgacggccagcgctaccacgaagcagtgcgcgactactggcgcacctttgtg
tatcccttgtccgatgcccagtttgccctgctggccagccactggccgacgccggacgcc
ttggccaacaccctgcgcccgctgctgggtgcgctgccgccgtccgactggcgcggcccg
caggcgctgggccaggcgctgacccgcattgcccgccaactggccgaactgaagcagtcc
tggccgcgccagcgggtggacgagctgcgccagctgcttgccggctggcaggcagacaaa
cgctataacggcacccgcctgcgcagcggtacggtaagcaagctgctcgacgcgctggag
gcctgggccagcacgccgacacaacacgatctggacgccagcctggattggagccggctg
tcgcccgcctttctggccgaaatctggaaaaaaactgagctgccgcctgtggtgccggca
ctggaggcgctggcggccctgcccgcccagctggaggccatcgtgccgtttgcccatggc
gtgctggtccatgccggccagtgggtaggcgacaacctggcccggcacaagcgccgtgaa
gcggtgatggactttgacgacctgctcacccggctggatgccgccctgcacggcccggat
ggcgagcggctggccagtgccatccgccggcagtttccggcggcgctggtggacgaattc
caggacaccgacccgctgcaataccgcatgctcaacaccctgtacccggtggcccagccg
ctgcctggcaccctgctggcgatgatcggcgacccgaaacaggcgatttacgcctttcgc
ggtggcgatatctttacctacctgaacgcccgccgcgccacggcgggccgccatgtcagc
ctgggcagcaatttccgttcgaccacagccatggtggcgcaggtcaaccagctgtttgcc
tttgccgaacagcagcatgccgccggggcgtttgcctttgccgatgaaactggcgagcgc
ctgctgcccttcgagccggtgcgcgccgcaggccgcagcgaggtgttgctgcatcgcggc
cagccgctggcggcgctgaatgtctggctggataccaccgcacagggggtgggcagctac
cgcgagcacatggccgagcgctgcgccgacagtctggtggcgctgctggccggtggccag
gccggcgacaccggctttgcccacgccgatggccgttttgccgcgctgtgtccggcggat
atcgccattctggtacgcgatggcagcgaggcgcgcagcgtgcgtcaggcgctggcccgg
cgcggcgtgcgcacggtgtatttgtccgaccgcgattcggtgtacgccagccgcgaagcc
caggacctgctgcactggctgcgcgcctgcgctgaacccacccaggagcgcctgctgcgc
acggcgctggccaccgccacgctggatttgccctacgcccggctggatgcgctcaacgac
gcgcacacccgcgactgggatgccgaagtggagcgctttgtccggctgcatggctgctgg
cagcgcgaaggcatcctgcccatgctgcgccagctgttgcagctgtttgacctgccggcc
cgctgcctgacgcgcgaaggcggcgaacgcacgctgaccaacctgctgcacctggccgag
ctgctgcatgccgccgccgagcagctggacggcgaacaggcgttgattcggcatctggcc
gagcagatggcccagcccgagcgtggcggcgacgagcgcatggtgcggctggaaagcgac
gctggtctggtgcgggtggtgaccatccacaaatccaaggggctggaatacccgctggtg
tgcctgccgtttgccgccagctacaagccggtggatggcagccggctgaccgcctaccgc
taccacgacccacaaccgccgtatgccgcccggctgtcgctgttcaaacgcgacgacgag
cgcaccgcgcaagaccgcgaacgcctgcaggaagacctgcgcctgttttatgtggcggtc
acccgcgcccgccacgcgctgtggctgggcattgcgccgctgcgtcggggcaatcataaa
aacaacaccctgcatgaaagcgcgctgggctatctgctgaccggcggtgccacgctggcc
gacgccgacctgactgacgcctgcctgcgctggctggatgctgaacacgccggcccggcc
cggctggcgatcaaccccgacctgggccacagcccggcgcggctgcctgccgacaccgac
gccaccgccctgggcgaggcccggacctgccagctgacccccacgccgccctggcggatg
agcagctatagcgcgctgattctgcgtctggagggcagcagcgcgccgctggcggaatcc
ggcctggatgaagccgcgcaggaaattgccgaagatatccggcccaatctggccacgccg
gccagtgcggtgggcgcggcaaggttgggcgatctgcccaccgggccggccagcggggta
tttgtgcatggcctgctggaatggatggcgcaggaaggctttgccacgctggccgcccag
ccggcccgcctgcgcgaccgggtggcacgcggctgcgccttgcgccagtgggaatcgctg
atcgagcctctctcccgccagctggaagcctggctgcacaccccgctgggcctgcccggc
ccagcggtgaccctggcgcagcttgaatgctatcaacccgaactggagttctggtttgcc
gcccaccagttacccctggcccggctcgaccagcaggtgcagcgcatgctgctgcccgga
cagccacgcccccagctgcgcaccgaccggctgaacggcatgctcaagggctttgtcgat
ctggtgctgtgccacgaaggccgctattacgtggtggactataaaaccaactttcttggg
ccgcgcctgggcgactatggtgctgacgcgctcactgccccgctggccgaagcgcgctac
gacctgcaggcagcgctttacctgctggcgctgcatcggcatttgcgcgaacgcctgccc
gattacgactgcgcccgccatctgggcggcgcggtgtatctgttcttgcgcggctgggat
ggcgcaggccatggcgtatggcacgcctgccccgacgccgcacagattcacgcgctggat
gcgctgtttgccggccagcccctgccaggagccaaccatgctgacctttga
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