Aquitalea sp. USM4: DKK66_16935
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Entry
DKK66_16935 CDS
T05865
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
aqs
Aquitalea sp. USM4
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqs03009
]
DKK66_16935
Enzymes [BR:
aqs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DKK66_16935
Ribosome biogenesis [BR:
aqs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DKK66_16935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBJ79604
UniProt:
A0A4P6TL80
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All DBs
Position
complement(3672813..3673916)
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AA seq
367 aa
AA seq
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MTDPYYDSEDYSDISENEVSASQQLEVPLSMGSERLDAALAKLLPDYSRSRLTQWIKDGH
VLVDGKVVPPKTRLLGGEKLDVTIVQSNEEMAYQAEAMDLPIIYEDEHILVVNKPAGLVV
HPASGNWTGTLLNGLLHHCPALAHVPRAGIVHRLDKDTSGLMVVAKTVPAQTELVRQLQA
RTVKRIYRAIADGVVPFDGTISTQIGRDPHNRLKMGVLKFGGKPAITHVRVLERFDSHSY
IECKLETGRTHQIRVHMREARHPLAGDAVYGNPRHKMDDYVADAVKLLARQALHAYKLAL
VHPATGEERSWQAPIPDDFMHLLNTLRGEGGERLEQAVLGEEGDEEDWDDEDDEDDDGDI
EVIYVRD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccttactatgactcggaggattatagcgatatctcggaaaacgaggtatct
gcaagtcaacagctggaggttccgctatccatgggtagcgaacgcctcgatgcagctctt
gccaaactcctccccgattactcccgcagccgcctgacccaatggatcaaggatggccat
gtactggtggacggcaaagtcgtccccccgaaaaccaggctgctgggtggcgaaaagctg
gacgttaccattgttcagtcaaatgaagaaatggcttaccaggcggaagccatggatttg
cccattatttatgaagatgaacacattctggtggtgaacaaaccggccggcctggtggtt
cacccggccagcggcaactggaccggcaccctgctcaacggcctgctgcaccactgcccc
gcgctcgcccacgtgccgcgcgccggtattgtgcaccggctggacaaggacaccagtggc
ctgatggtggtagccaagaccgttcccgcacaaaccgaactggtacgccagctgcaagca
cgcacggtaaagcgcatttaccgcgccattgccgatggcgtggtgccgtttgacggcacc
atcagcacccagattggccgcgacccgcacaaccgcctgaaaatgggggtgctgaaattt
ggcggcaagccggccattacccatgtgcgtgtgctggaacgcttcgacagccattcctat
atcgaatgcaagctggaaaccggccgcacccaccagattcgcgtgcacatgcgtgaagcc
cgccatccgctggccggcgacgccgtatacggcaacccgcgccacaagatggacgactac
gtggccgacgcggtcaagctgctggcccgtcaggccctgcacgcctacaagctggcgctg
gttcaccccgccactggcgaagagcgcagctggcaggcccccatcccggatgacttcatg
cacctgctcaacaccctgcgcggcgaaggcggcgaacgactggaacaggccgtcctgggt
gaagaaggcgacgaagaagactgggacgacgaggatgatgaagacgacgatggcgacatc
gaggtgatttatgtccgtgactga
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