Amphimedon queenslandica (sponge): 100632290
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Entry
100632290 CDS
T02284
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100632290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100632290
03041 Spliceosome [BR:
aqu03041
]
100632290
03009 Ribosome biogenesis [BR:
aqu03009
]
100632290
03016 Transfer RNA biogenesis [BR:
aqu03016
]
100632290
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100632290
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
100632290
Spliceosome [BR:
aqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100632290
Complex C
U4/U6.U5 tri-SnRNP related factors
100632290
Ribosome biogenesis [BR:
aqu03009
]
Eukaryotic type
Pre-60S particles
Helicases
100632290
Transfer RNA biogenesis [BR:
aqu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
100632290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
MTR4-like_stalk
DEAD
Helicase_C
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100632290
NCBI-ProteinID:
XP_019852783
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MALFSGDLFSVFDEESSTGSEKKRPAKRASSNGSSSPRESSATRTKRQKLDLDSLEADDD
DSTEKQEDERTELEGTKRVPFFGEPAIIVNIDTEDTCTHEVSVPANYKFESLKPLNEKPA
KEYPFKLDSFQRKAIQCIENNQSVLVSAHTSAGKTVVAEYAIAVSLRDRQRVIYTTPLKA
LSNQKYREMYEEFKDVGLMTGDTTINPTASCIVMTTEILRSMLYRGSEVMREVGWVVFDE
IHYMRDKVLLVHMSVLVIISILCVTVFKMMTLSSPCHVVYTEQRPVPLQHYLYPAGADGL
YLVVDENGKFREDNFQTAMSCLQESGIGNKKGTKGPSNCYKVVKMIMERSLQPVIIFSFS
RRECEALALQMSKLDFNTAREKELVDEVFTNAIDCLSDDDKQLPQVVHLLPLLKRGIGIH
HSGLLPILKETIEILFSEGLIKALFATETFALGLNMPARTVVFTNARKFDGKDFRWITSG
EYIQMSGRAGRRGLDERGIVMLMIDEQMDSTIGKTLLKGQPDPLNSAFHLTYNMVLNLLR
VEEINPEYMLERSFYQFQNNSTIPDLEEKVKVLEKKRDALVIEDEDNVTSYYKMRDHISK
LSMQMQRFITKPTYCIPFMQPGRLVNVIVDGADFGWGAVINFQKKTSQTTSIPETIYIVE
VLLRCSTDSAVPKPATGHNNREEMRIIPSSLNSLHKLSSVRVYLPKDLRPSDSRFMVGKS
IDEVIKRFPDGLPLLDPVADMNIKDEEFKKIVKKIEALEKRLVTSVAHKNPNLEQLNSLC
QRKIELSSAVRESKRELKKAQTIMQMDELKCRKRVLRRLGYANSSDVIELKGRVACEIDC
GEELLLTEMIFNGAFNDLSVEQCVALLSCFVFQEKTDEMPKLTEELSGPLRLMQDSARKI
AKVAKEAKLDIDEDTYVESFRPHLMDVLHAWSTGAAFSQICKMTDVFEGSIIRCIRRLEE
ILRQMCQAAKTIGNTELENKFAQGIMRIKRDIVFAASLYL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttctctggtgaccttttcagcgtctttgatgaagagtctagcactgggagt
gaaaagaaaaggccagccaaaagagcctcgtctaatggttcctcttccccgcgcgagtcc
tcggccactcgtaccaaaagacagaaactagacctggacagtcttgaagctgatgatgat
gactccactgagaagcaagaagatgagaggactgagcttgaaggcacaaagagggttccg
ttttttggtgaaccagccattattgtcaacattgatactgaagacacctgcacacatgaa
gtttctgttcctgcaaattacaagtttgagtctttgaaaccgctgaacgaaaaacctgca
aaagagtatccatttaaattggatagtttccagaggaaagccatccaatgcattgagaac
aaccagtcagtcctagtctcagcccatacctcagcaggaaagactgtagtagcagagtat
gccatcgctgtatcactgagggatcgtcaacgtgtcatttatacaacaccgttgaaggct
ttgagtaatcagaagtacagggagatgtatgaggagtttaaagatgttggactaatgacc
ggagacactaccattaatccaacagcatcgtgtattgtcatgactactgaaatattaagg
agtatgttatacagaggatcagaggtgatgcgtgaagtgggttgggttgtatttgatgag
attcactacatgagggacaaagtattacttgtacatatgtctgtactggtgattataagc
atactgtgtgttactgtattcaagatgatgacattaagttctccttgtcatgtggtgtat
accgagcagaggccggtgccattgcagcactatctctatcctgctggagctgacggtctt
tatcttgtggtggatgagaatggaaagtttcgtgaggataatttccaaactgccatgtct
tgccttcaagaatccggtatagggaataagaaaggaactaaaggtccttcaaattgttac
aaagtggtgaagatgataatggagcgtagtctccagcctgtcatcatattcagtttcagt
aggagagagtgtgaagcattagctctccaaatgtcaaagcttgatttcaacacagcccgg
gagaaggagctggtagatgaagtattcactaacgccatcgactgtctctctgatgatgac
aagcagctaccacaagttgttcatctcctcccattattaaagcgaggcattggcatacat
cactctggtctactccccatcctcaaggagactattgagatattgttctctgaaggactc
ataaaggctctctttgctactgagacgtttgctcttggactcaacatgcccgcaaggact
gtggtctttactaatgctaggaagtttgatggaaaggactttagatggattacttctggt
gagtatatacagatgagtgggcgtgccggtaggcgtggcctggacgagagaggtattgta
atgttaatgattgatgaacagatggactccaccattggcaagacattactaaagggtcag
cctgatcctctcaacagtgcctttcatctcacctacaatatggtcctcaacctcttgaga
gttgaagagatcaaccctgagtacatgctggagagatccttctatcagtttcagaataat
tccactatacccgacctggaggaaaaggtcaaagtccttgagaagaagagagatgctctg
gtgatagaggatgaggataacgtgaccagttattacaagatgagagaccacatcagcaag
ctatcaatgcaaatgcagaggttcatcacgaagccgacctattgcatcccattcatgcag
cctggcagactcgttaatgtcattgttgatggtgctgattttggctggggagctgtaatt
aactttcaaaagaagacatcgcaaacaacatcaatcccagagaccatatatattgttgaa
gtattattgaggtgttccactgattctgctgtccctaaaccagccactggtcataataac
agagaagaaatgagaattataccttcatcacttaattcacttcacaagttgagctctgtc
agggtctacctacctaaggatcttagaccttctgatagtagattcatggttggaaaatct
atagatgaagtgataaagagattccctgatggtcttccattgctggatccagtagctgac
atgaacatcaaggatgaggaattcaagaaaattgttaaaaaaattgaagcacttgagaag
cgactggtcactagtgttgctcataaaaatccaaaccttgagcaattgaattcattatgt
cagaggaagattgagttaagttctgcagtaagagagtccaagagagaactaaagaaagca
cagacgataatgcaaatggatgaactgaagtgtaggaaacgtgtacttagaagattaggg
tatgctaattcttcagatgtgattgaattaaaaggaagagtagcatgtgaaatagactgt
ggtgaggagttgttgctcactgagatgatattcaatggagccttcaatgacctttcagtg
gaacagtgtgtggctttactctcatgttttgtattccaggaaaagactgatgagatgcct
aaactaactgaagagctgtctggtccactgagactcatgcaggattctgctcgtaaaatt
gcaaaagtagccaaagaagcaaagcttgatattgatgaggatacctatgtggagagtttt
cgacctcatctaatggacgtgttacatgcttggagcacaggtgctgctttctctcagatc
tgcaaaatgactgacgtttttgaagggagcataatccgttgcattaggaggttagaggag
attcttagacaaatgtgtcaggcagcaaaaacgatagggaatactgagcttgagaacaaa
tttgcgcaaggtattatgaggataaagagagatattgtgtttgctgccagtctttatctt
tga
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