KEGG   Amphimedon queenslandica (sponge): 100636734Help
Entry
100636734         CDS       T02284                                 

Definition
(RefSeq) DNA ligase 4-like
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100636734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aqu03400]
    100636734
Enzymes [BR:aqu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100636734
DNA repair and recombination proteins [BR:aqu03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100636734
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT BRCT_2 DNA_ligase_IV RNA_ligase LIG3_BRCT PTCB-BRCT mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 100636734
NCBI-ProteinID: XP_019856983
UniProt: A0A1X7VRP5
LinkDB All DBs
Position
Unknown
AA seq 942 aa AA seqDB search
MAEKMESSDHDTGTGGGGGESKSVASQVPFQDFCGLLERIQSLSGTERKKTSLDRFIKQW
RDTHNKLHLPGTIHSDSFYPAMRLLLPYLDRQRPAYGLKEVSLAKQYIDILKIAKDSPDA
KKLLNYRTPHAAKHDATDFAGVAYFVLRNRCPEKGSLSMEQVNQCLDELALSNVTKDRGG
VKKSLQHLLRNTSAQEQKWLIRIIMKELKIGLSENSILTVFHPDGQDLFSVTSNLEKVCV
DLHSPTVRLNEAAISYFTPFRPMLGQRATIDQVVKLMDHQPFFIENKFDGERIQLHKQHG
QYRYYSRSSREYTSTFGGTEREGSFTPNIHKAFNSKVHSCILDGEMVGWDKETESYLPKG
ENVDVKTLAPVSEGGGGGENGVQPCFVVFDALMINETNLANCPLRERVEHLNKVFEVVPG
CLHKAERIERSTKEDVILSLNEAIDRREEGLVIKQPSSLYKPDKRKGSGWLKIKPDYVDS
LSDDLDLLIIGGYFGVGRRAGMISHFMCGVAVPPAIKGDKPTVFHSFCKVGSGYTMNELR
ELGHKLKPHWRKFDTKRPPESVILAPGFKEKPDLWIEPKDAKIVQIRAAEIIVSDKYRTG
CTLRFPRLERVREDKEWFDCMSLDELEDLKRVASGHLAHRHYEEGEGEELTTSKKRRRVT
RIDRPAGVASQFRHTDVSSVEEVSSMFAGKQFCVINGTPSFSKQYIETKIAEHGGTFVQN
PTTDTYCVLVHKLVVKANNIISKGIYNVVMIQWLLDCLETGRCLPLKPSLMYSTSSETAS
KFSEIYDKYGDSYIHDTSETTLREIFDKMKDKRSCSADEIAKMEFEYFPNESAKGLFRHF
KFYFDKYEVINDPSTVIINSSLSLPELDARLCGGTVTDDFNESVTHVVFDKSDLQRLSSL
RLKQKSHAKKSHFITSDWISACIEHKYCKNERLFEPIVTTKD
NT seq 2829 nt NT seq  +upstreamnt  +downstreamnt
atggcagagaaaatggagagctctgatcatgatacagggacaggaggaggaggaggagag
agtaaatctgttgcttctcaggttccatttcaagatttctgtggactgttagagaggatc
cagtcgttaagtggaactgagcgaaagaagaccagtctggaccggttcattaaacaatgg
agggacacacacaacaagctccacctacctggtaccatccattccgatagtttctatcca
gccatgcgtctgttactaccatatttggacagacagagacccgcctacggactgaaggag
gtatcactagctaagcagtacatagacatattgaagatagctaaagacagccctgatgct
aagaaactgttaaactatagaacacctcatgctgctaaacacgatgcaactgattttgct
ggagtagcttactttgtcctaaggaaccgttgccctgagaagggaagtctatcaatggaa
caggttaatcaatgcttggatgagctggccctatctaatgtcactaaggacagaggagga
gtgaagaaatctcttcaacatttattaagaaacacctcagcacaggagcagaagtggctc
ataagaataataatgaaggagctaaagataggactgagtgagaactcaatccttacagtg
tttcatcctgacggacaggacctgttcagtgtcactagcaacctcgagaaggtatgtgtt
gatctacactctcctactgttagattgaatgaggcagccattagctacttcactccattc
agaccaatgcttggacagagagccaccatagaccaggtcgttaagctaatggatcaccag
cctttctttattgagaataagtttgatggtgagaggattcagttacacaagcaacacgga
cagtatcggtattactccaggagttctcgtgagtacacctccacctttggtgggacggaa
agagaaggatccttcactcctaacatacacaaggcttttaacagcaaggttcactcctgt
atactggatggagagatggttgggtgggacaaggagactgagtcttaccttccaaaagga
gagaatgttgatgtaaagacactagcccctgttagtgaaggaggaggaggaggagagaat
ggtgtgcagccgtgttttgttgtgttcgatgcattaatgatcaatgagactaaccttgct
aactgcccactgagggaaagagtagagcatcttaacaaggtatttgaagtggttcctggt
tgcttacataaagcagaaagaattgaaagatcaacaaaggaggatgtgatcctgtcactg
aatgaagccattgacagaagagaggaaggactagtcattaaacaaccttcttcattgtac
aaaccagacaaaagaaaaggtagtggttggttgaagatcaaacctgattatgttgattca
ctcagtgatgatcttgatctactgatcatcggaggatattttggggttggacgtagggcc
ggaatgatatcccatttcatgtgtggagtagctgtacctcctgccatcaagggagacaaa
ccaacagtgtttcattcattttgtaaagttggctctggctacactatgaatgagttgaga
gagctgggtcacaagttgaagccacactggaggaagtttgataccaagagaccaccggaa
tcagttatactagcacctggttttaaagagaaacctgatctttggattgaaccaaaggat
gctaagattgttcaaatcagagcagctgagatcattgtatctgacaagtacaggacaggt
tgtaccttaaggtttccaaggttagagagagtgagagaggataaagaatggtttgattgt
atgtcactagatgaactggaggaccttaaaagagtagcctcaggtcatttagctcatcgt
cattatgaggagggggagggggaggaactcaccacgtccaaaaagagaaggagagtgact
aggatagatagaccagctggtgttgcctcacagttcagacatactgatgtatccagtgtg
gaggaggtatcttcaatgtttgctggtaagcagttctgtgttattaatggaactccgtct
ttcagtaaacaatatattgagactaagattgctgagcacggaggtacttttgtacagaat
ccaactacagatacttattgtgtgctggttcataaactggtcgttaaggctaataatatt
atcagtaaaggtatttataatgtggtcatgatccaatggctcctggactgtctggagacc
gggaggtgtctgccattgaagccctcactgatgtatagcacatcctctgagactgctagc
aagttctctgaaatatatgataagtatggtgatagttatattcatgatactagcgagaca
actttgagggaaatattcgataaaatgaaagacaaaaggagttgttctgctgatgaaatt
gctaaaatggagtttgagtattttccaaatgaatcagccaaaggactcttcagacatttt
aagttctattttgataaatatgaagtcattaatgatccttcaacagtaataataaactca
tcattgtcactgccagaattagatgcaagactgtgtggtggtacagtaactgatgacttc
aatgaatcagtgactcacgtcgtgtttgataaaagtgacctgcagagactgtccagttta
aggttgaagcagaagtcacatgcaaagaaaagtcactttataaccagtgactggatcagt
gcctgtattgaacacaagtattgtaagaatgaaagactatttgaaccaatagttacaaca
aaagattga

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