Amphimedon queenslandica (sponge): 100638027
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Entry
100638027 CDS
T02284
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03420
Nucleotide excision repair
aqu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100638027
09124 Replication and repair
03420 Nucleotide excision repair
100638027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aqu04121
]
100638027
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100638027
Ubiquitin system [BR:
aqu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100638027
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100638027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
TFIIIC_delta
NBCH_WD40
DUF4633
Motif
Other DBs
NCBI-GeneID:
100638027
NCBI-ProteinID:
XP_011409519
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
QLLRDRRAGLEEEWTLPKVYASHKWTQLSLSRNREFERSHDNGITSMQLDHTSQRYLLSG
TTDGSIFIQDTRYQVGVARQTCPTVAFNRGSTTPSSHTHSISELKWYPHDTGIFTSSSMD
KTLRIWDTNEMCVVENFKMSSPIYTHDLAKAMKHTLTAVGTKDGIVTICDMNSGSSSHIL
KRHKKPVMTVQWSPSDEYTLATGSQDNQ
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
cagctcctaagggacaggagggcggggcttgaagaggaatggacactccctaaggtctac
gcttcacacaaatggactcaactgtcactgagcaggaacagagaatttgagagatcacac
gacaacggaattacgtccatgcaattagaccacacctcccaaagatatttattatcaggt
acaactgatggctccattttcattcaagacactcgttatcaagtgggtgtggctcgtcaa
acctgtcccacagttgcattcaatcgtggaagcaccacaccctcctctcacactcacagt
atttcagagttgaagtggtaccctcatgacactgggatctttaccagttcctcgatggat
aaaaccttaagaatatgggatactaatgagatgtgtgtagtggagaattttaaaatgagt
agtccaatttatacccatgatttagcaaaagcaatgaagcacacattgacagctgttggt
accaaagatggtatcgttaccatatgtgacatgaactctggctccagtagtcatatattg
aagagacacaagaaaccagtaatgacagtacaatggtcgccttctgatgaatacacccta
gctacaggaagtcaggataatcag
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integrated database retrieval system