Rhizobium rhizogenes K84: Arad_12433
Help
Entry
Arad_12433 CDS
T00850
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_12433
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_12433
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Arad_12433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACM31400
UniProt:
B9JQI1
LinkDB
All DBs
Position
pAtK84c:329426..331021
Genome browser
AA seq
531 aa
AA seq
DB search
MVFDGLSRNTASRFLGALLGLALVTSAAFAEDRGGTLNLIVQPEPISLNPGVNRLGPATF
VGDKIYDSLVSYAQKDLAPIPRLAESWTVSPDGKTYTFKLRAGVTWHDGEPFTSKDVSFS
YSEFLPALQARSRDLRNEIERIEIPDDLTVVFVLKNPYPAFLRSLNAAIVPAHKYVGVTD
FRNAPANAEFIGTGPFKFAEWKKGSLIRLVRNDKYWDTGKPYLDEIDFQIIPDANSRAIA
FETGQVDALRAGDVENFDIPRLSALDGVKIREDGWEYLQPIGYVHLNNRNPILAKLQVRQ
AITQAIDRDFIINTIFAGFGKPINGPFSSLSVYKDASVETVYPFDPQKAAALLDEAGYKP
GPDGTRFTLKLVPLPYGELWSREAEYLREALGEVGIKVDIVSTDVAGWFKRLTIFDYDIA
ENFVYTTADPAIGISYGYKTVKGDKAGTTGANVNGYSNPEVDALLDQGSHQPDEAKRKEI
YSKVQQIISHDVPLVWTHDIVFPTLYRDRVQDLITTALGTDDNFASVWLRK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgatggactttcgagaaacacggcttcccgttttctgggcgccctactcggg
ttggcgcttgttaccagtgcggcctttgcggaagacaggggcggcacgctgaacctgatc
gtgcagccggagccgatctccctaaacccgggcgtcaaccgcctcgggccggcaaccttc
gtcggcgacaaaatctacgattcgctcgtaagttacgcccagaaggatctggcgcctatc
ccgcgacttgccgaaagctggactgtttcgcccgacggcaaaacctatacgttcaagctc
agggcgggcgttacctggcatgacggcgagccctttacatccaaggatgtctccttcagc
tacagtgaattcctgcctgcgctgcaagcccgctcgcgcgatctgcgcaacgaaatcgag
cgtatcgagataccggatgatcttaccgtcgtttttgtcctgaaaaatccttatccggct
ttcctgcggtcactaaacgcggcgattgttcccgcacacaaatatgtcggcgtcaccgat
ttccgcaacgccccggccaatgccgagttcatcggtaccgggccgttcaagttcgcggag
tggaagaagggtagcctgatccgcctggtgcgtaacgacaaatattgggataccggcaaa
ccctatctcgacgagatcgatttccagatcataccggatgcaaattcgcgggcgattgcg
ttcgaaacgggccaggtcgacgccctgcgcgcaggcgatgtcgagaatttcgatattccg
cgtctttcggcgcttgatggcgtcaagatacgcgaggacggttgggaatatctacagccg
atcggctatgttcacctcaacaaccgcaatccgatccttgccaagctgcaggtccgccaa
gccattacgcaggcgatcgatcgcgatttcatcatcaacacgatcttcgcaggcttcggc
aagccgatcaacggcccattttcgagcctgtcggtctacaaggatgcaagcgtcgaaacc
gtctaccctttcgacccgcagaaagctgcagcgctacttgatgaggccggctacaagccc
gggccggatggaacgcgcttcacactgaagctcgttccgcttccttatggcgaactttgg
tcccgcgaggccgaatatctgcgcgaagcccttggtgaagtcggcattaaggtcgacatc
gtttccaccgacgttgccggctggttcaagcggcttaccatctttgactatgacatcgcc
gagaacttcgtctatacaaccgccgatccggcgatcggtatttcctatggctacaagacg
gtcaaaggcgacaaggccggcaccacgggcgccaatgtcaacggctattccaacccggag
gtcgatgccttgctggatcagggctcgcatcagcccgacgaagccaagcgcaaggagatc
tattcgaaggtgcagcagatcatatcgcacgacgtgcctttggtctggactcatgacatc
gtcttccccaccctatatcgagacagggtgcaggatctgatcaccaccgcgctcggcacg
gacgacaacttcgcctcggtttggctgaggaaatga
DBGET
integrated database retrieval system
